The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)

Bupleurum chinense DC. is a traditional medicinal herb species widely distributed in most provinces of China. In this study, we constructed and annotated a complete circular chloroplast (cp) genome of B. chinense. The cp genome of B. chinense is 155,545 bp in length, including two inverted repeat (I...

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Detalles Bibliográficos
Autores principales: Zhang, Fei, Zhao, Zhenyu, Yuan, Qingjun, Chen, Suiqing, Huang, Luqi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707502/
https://www.ncbi.nlm.nih.gov/pubmed/33366133
http://dx.doi.org/10.1080/23802359.2019.1678427
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author Zhang, Fei
Zhao, Zhenyu
Yuan, Qingjun
Chen, Suiqing
Huang, Luqi
author_facet Zhang, Fei
Zhao, Zhenyu
Yuan, Qingjun
Chen, Suiqing
Huang, Luqi
author_sort Zhang, Fei
collection PubMed
description Bupleurum chinense DC. is a traditional medicinal herb species widely distributed in most provinces of China. In this study, we constructed and annotated a complete circular chloroplast (cp) genome of B. chinense. The cp genome of B. chinense is 155,545 bp in length, including two inverted repeat (IR) regions of 26,305 bp, separated by a large single-copy (LSC) region of 85,430 bp and a small single-copy (SSC) region of 17,505 bp. The GC content of whole cp genome is 37.68%. The genome contains 113 different genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. A maximum-likelihood phylogenomic analysis showed that Bupleurum formed a monophyletic group, and was sister to other groups of Apiaceae.
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spelling pubmed-77075022020-12-22 The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae) Zhang, Fei Zhao, Zhenyu Yuan, Qingjun Chen, Suiqing Huang, Luqi Mitochondrial DNA B Resour Mitogenome Announcement Bupleurum chinense DC. is a traditional medicinal herb species widely distributed in most provinces of China. In this study, we constructed and annotated a complete circular chloroplast (cp) genome of B. chinense. The cp genome of B. chinense is 155,545 bp in length, including two inverted repeat (IR) regions of 26,305 bp, separated by a large single-copy (LSC) region of 85,430 bp and a small single-copy (SSC) region of 17,505 bp. The GC content of whole cp genome is 37.68%. The genome contains 113 different genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. A maximum-likelihood phylogenomic analysis showed that Bupleurum formed a monophyletic group, and was sister to other groups of Apiaceae. Taylor & Francis 2019-10-18 /pmc/articles/PMC7707502/ /pubmed/33366133 http://dx.doi.org/10.1080/23802359.2019.1678427 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Fei
Zhao, Zhenyu
Yuan, Qingjun
Chen, Suiqing
Huang, Luqi
The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title_full The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title_fullStr The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title_short The complete chloroplast genome sequence of Bupleurum chinense DC. (Apiaceae)
title_sort complete chloroplast genome sequence of bupleurum chinense dc. (apiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707502/
https://www.ncbi.nlm.nih.gov/pubmed/33366133
http://dx.doi.org/10.1080/23802359.2019.1678427
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