Cargando…
Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707520/ https://www.ncbi.nlm.nih.gov/pubmed/33366128 http://dx.doi.org/10.1080/23802359.2019.1678422 |
_version_ | 1783617366557458432 |
---|---|
author | Wu, Kai Yang, Jinge Ni, Yuyang Liu, Qiuning |
author_facet | Wu, Kai Yang, Jinge Ni, Yuyang Liu, Qiuning |
author_sort | Wu, Kai |
collection | PubMed |
description | The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled, and annotated. The sequence length of the genome was found to be 15,737 bp, containing 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and an A + T-rich region compared with the genomes of other lepidopterans. The overall nucleotide composition is: 37.3% T, 40.5% A, 14.6% C, and 7.6% G, demonstrating an AT bias (A + T: 77.8%). Our phylogenetic tree analysis results showed that T. pityocampa and Ochrogaster lunifer were the most similar species, with the closest evolutionary distance. The mitogenome sequence determined in this study will contribute to improved understanding of Notodontidae evolution. |
format | Online Article Text |
id | pubmed-7707520 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77075202020-12-22 Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) Wu, Kai Yang, Jinge Ni, Yuyang Liu, Qiuning Mitochondrial DNA B Resour Mitogenome Announcement The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled, and annotated. The sequence length of the genome was found to be 15,737 bp, containing 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and an A + T-rich region compared with the genomes of other lepidopterans. The overall nucleotide composition is: 37.3% T, 40.5% A, 14.6% C, and 7.6% G, demonstrating an AT bias (A + T: 77.8%). Our phylogenetic tree analysis results showed that T. pityocampa and Ochrogaster lunifer were the most similar species, with the closest evolutionary distance. The mitogenome sequence determined in this study will contribute to improved understanding of Notodontidae evolution. Taylor & Francis 2019-10-21 /pmc/articles/PMC7707520/ /pubmed/33366128 http://dx.doi.org/10.1080/23802359.2019.1678422 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wu, Kai Yang, Jinge Ni, Yuyang Liu, Qiuning Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title | Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title_full | Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title_fullStr | Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title_full_unstemmed | Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title_short | Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) |
title_sort | identification and analysis of the complete mitochondrial genome of thaumetopoea pityocampa (lepidoptera: notodontidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707520/ https://www.ncbi.nlm.nih.gov/pubmed/33366128 http://dx.doi.org/10.1080/23802359.2019.1678422 |
work_keys_str_mv | AT wukai identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae AT yangjinge identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae AT niyuyang identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae AT liuqiuning identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae |