Cargando…

Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)

The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Kai, Yang, Jinge, Ni, Yuyang, Liu, Qiuning
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707520/
https://www.ncbi.nlm.nih.gov/pubmed/33366128
http://dx.doi.org/10.1080/23802359.2019.1678422
_version_ 1783617366557458432
author Wu, Kai
Yang, Jinge
Ni, Yuyang
Liu, Qiuning
author_facet Wu, Kai
Yang, Jinge
Ni, Yuyang
Liu, Qiuning
author_sort Wu, Kai
collection PubMed
description The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled, and annotated. The sequence length of the genome was found to be 15,737 bp, containing 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and an A + T-rich region compared with the genomes of other lepidopterans. The overall nucleotide composition is: 37.3% T, 40.5% A, 14.6% C, and 7.6% G, demonstrating an AT bias (A + T: 77.8%). Our phylogenetic tree analysis results showed that T. pityocampa and Ochrogaster lunifer were the most similar species, with the closest evolutionary distance. The mitogenome sequence determined in this study will contribute to improved understanding of Notodontidae evolution.
format Online
Article
Text
id pubmed-7707520
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77075202020-12-22 Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae) Wu, Kai Yang, Jinge Ni, Yuyang Liu, Qiuning Mitochondrial DNA B Resour Mitogenome Announcement The mitochondrial genome (mitogenome) provides important information for phylogenetic analysis and understanding evolutionary origins. Thaumetopoea pityocampa is a forest pest that harms nearly all cedar and pine species. In this study, the T. pityocampa mitochondrial genome was sequenced, assembled, and annotated. The sequence length of the genome was found to be 15,737 bp, containing 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and an A + T-rich region compared with the genomes of other lepidopterans. The overall nucleotide composition is: 37.3% T, 40.5% A, 14.6% C, and 7.6% G, demonstrating an AT bias (A + T: 77.8%). Our phylogenetic tree analysis results showed that T. pityocampa and Ochrogaster lunifer were the most similar species, with the closest evolutionary distance. The mitogenome sequence determined in this study will contribute to improved understanding of Notodontidae evolution. Taylor & Francis 2019-10-21 /pmc/articles/PMC7707520/ /pubmed/33366128 http://dx.doi.org/10.1080/23802359.2019.1678422 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Kai
Yang, Jinge
Ni, Yuyang
Liu, Qiuning
Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title_full Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title_fullStr Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title_full_unstemmed Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title_short Identification and analysis of the complete mitochondrial genome of Thaumetopoea pityocampa (Lepidoptera: Notodontidae)
title_sort identification and analysis of the complete mitochondrial genome of thaumetopoea pityocampa (lepidoptera: notodontidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707520/
https://www.ncbi.nlm.nih.gov/pubmed/33366128
http://dx.doi.org/10.1080/23802359.2019.1678422
work_keys_str_mv AT wukai identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae
AT yangjinge identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae
AT niyuyang identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae
AT liuqiuning identificationandanalysisofthecompletemitochondrialgenomeofthaumetopoeapityocampalepidopteranotodontidae