Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China

Gentiana delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of G. delavayi to investigate its phylogenetic relationship in the family Gentianaceae. The chloroplast genome of G. delavayi was 151,569 bp in length...

Descripción completa

Detalles Bibliográficos
Autores principales: Tao, Ai-En, Zhao, Fei-Ya, Xia, Cong-Long
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707525/
https://www.ncbi.nlm.nih.gov/pubmed/33366120
http://dx.doi.org/10.1080/23802359.2019.1677196
_version_ 1783617367744446464
author Tao, Ai-En
Zhao, Fei-Ya
Xia, Cong-Long
author_facet Tao, Ai-En
Zhao, Fei-Ya
Xia, Cong-Long
author_sort Tao, Ai-En
collection PubMed
description Gentiana delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of G. delavayi to investigate its phylogenetic relationship in the family Gentianaceae. The chloroplast genome of G. delavayi was 151,569 bp in length with 37.8% overall GC content, including a large single copy (LSC) region of 81,177 bp, a small single copy (SSC) region of 16,921 bp and a pair of inverted repeats (IRs) of 25,471 bp. The cp genome contained 114 genes, including 78 protein coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated G. delavayi was closely related to G. stipitata.
format Online
Article
Text
id pubmed-7707525
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77075252020-12-22 Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China Tao, Ai-En Zhao, Fei-Ya Xia, Cong-Long Mitochondrial DNA B Resour Mitogenome Announcement Gentiana delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of G. delavayi to investigate its phylogenetic relationship in the family Gentianaceae. The chloroplast genome of G. delavayi was 151,569 bp in length with 37.8% overall GC content, including a large single copy (LSC) region of 81,177 bp, a small single copy (SSC) region of 16,921 bp and a pair of inverted repeats (IRs) of 25,471 bp. The cp genome contained 114 genes, including 78 protein coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated G. delavayi was closely related to G. stipitata. Taylor & Francis 2019-10-18 /pmc/articles/PMC7707525/ /pubmed/33366120 http://dx.doi.org/10.1080/23802359.2019.1677196 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Tao, Ai-En
Zhao, Fei-Ya
Xia, Cong-Long
Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title_full Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title_fullStr Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title_full_unstemmed Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title_short Characterisation of the complete chloroplast genome of Gentiana delavayi Franch. (gentianaceae), a medicinal plant in southwest of China
title_sort characterisation of the complete chloroplast genome of gentiana delavayi franch. (gentianaceae), a medicinal plant in southwest of china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707525/
https://www.ncbi.nlm.nih.gov/pubmed/33366120
http://dx.doi.org/10.1080/23802359.2019.1677196
work_keys_str_mv AT taoaien characterisationofthecompletechloroplastgenomeofgentianadelavayifranchgentianaceaeamedicinalplantinsouthwestofchina
AT zhaofeiya characterisationofthecompletechloroplastgenomeofgentianadelavayifranchgentianaceaeamedicinalplantinsouthwestofchina
AT xiaconglong characterisationofthecompletechloroplastgenomeofgentianadelavayifranchgentianaceaeamedicinalplantinsouthwestofchina

Ejemplares similares