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The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)

Melliodendron xylocarpum Handel-Mazzetti is a rare tree, distinct member of the family Styracaceae. In this study, we determined the complete chloroplast (cp) genome sequence of M. xylocarpum in an effort to provide genomic resources useful for promoting its conservation. The entire cp genome was de...

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Autores principales: Zhao, Zixun, Xu, Xiaogang, Tong, Lili, Zhang, Yaoqin, Wang, Yabo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707565/
https://www.ncbi.nlm.nih.gov/pubmed/33366139
http://dx.doi.org/10.1080/23802359.2019.1677521
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author Zhao, Zixun
Xu, Xiaogang
Tong, Lili
Zhang, Yaoqin
Wang, Yabo
author_facet Zhao, Zixun
Xu, Xiaogang
Tong, Lili
Zhang, Yaoqin
Wang, Yabo
author_sort Zhao, Zixun
collection PubMed
description Melliodendron xylocarpum Handel-Mazzetti is a rare tree, distinct member of the family Styracaceae. In this study, we determined the complete chloroplast (cp) genome sequence of M. xylocarpum in an effort to provide genomic resources useful for promoting its conservation. The entire cp genome was determined to be 157,165 bp in length. It contains the typical structure and gene content of angiosperm plastome, The plastome contains a large single-copy (LSC) and a small single-copy (SSC) regions of 90,193 and 18,486 bp, respectively, which were separated by a pair of 24,243 bp inverted repeat (IR) regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of M. xylocarpum genome is 37.21%. The complete plastome sequence of M. xylocarpum will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies for Styracaceae. Phylogenetic analysis revealed that M. xylocarpum is closely related to Changiostyrax dolichocarpus H.S.Lo & D.Fang, but forms an independent evolutionary branch.
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spelling pubmed-77075652020-12-22 The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae) Zhao, Zixun Xu, Xiaogang Tong, Lili Zhang, Yaoqin Wang, Yabo Mitochondrial DNA B Resour Mitogenome Announcement Melliodendron xylocarpum Handel-Mazzetti is a rare tree, distinct member of the family Styracaceae. In this study, we determined the complete chloroplast (cp) genome sequence of M. xylocarpum in an effort to provide genomic resources useful for promoting its conservation. The entire cp genome was determined to be 157,165 bp in length. It contains the typical structure and gene content of angiosperm plastome, The plastome contains a large single-copy (LSC) and a small single-copy (SSC) regions of 90,193 and 18,486 bp, respectively, which were separated by a pair of 24,243 bp inverted repeat (IR) regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The GC content of M. xylocarpum genome is 37.21%. The complete plastome sequence of M. xylocarpum will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies for Styracaceae. Phylogenetic analysis revealed that M. xylocarpum is closely related to Changiostyrax dolichocarpus H.S.Lo & D.Fang, but forms an independent evolutionary branch. Taylor & Francis 2019-10-21 /pmc/articles/PMC7707565/ /pubmed/33366139 http://dx.doi.org/10.1080/23802359.2019.1677521 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhao, Zixun
Xu, Xiaogang
Tong, Lili
Zhang, Yaoqin
Wang, Yabo
The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title_full The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title_fullStr The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title_full_unstemmed The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title_short The complete chloroplast genome sequence of Melliodendron xylocarpum (Styracaceae)
title_sort complete chloroplast genome sequence of melliodendron xylocarpum (styracaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707565/
https://www.ncbi.nlm.nih.gov/pubmed/33366139
http://dx.doi.org/10.1080/23802359.2019.1677521
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