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The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou
Neocinnamomum delavayi (Lec.) Liou is a kind of medicinal plants belonging to the genus Neocinnamomum H. Liu, but is often confused with N. mekongense (Hand.-Mazz.) Kosterm. Here, the complete plastid sequence of the N. delavayi was determined. The length of the plastid genome is 150,584 bp with ove...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707612/ https://www.ncbi.nlm.nih.gov/pubmed/33366155 http://dx.doi.org/10.1080/23802359.2019.1679051 |
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author | Ren, Shulin Song, Yu Zhao, Meili Xu, Wenbin |
author_facet | Ren, Shulin Song, Yu Zhao, Meili Xu, Wenbin |
author_sort | Ren, Shulin |
collection | PubMed |
description | Neocinnamomum delavayi (Lec.) Liou is a kind of medicinal plants belonging to the genus Neocinnamomum H. Liu, but is often confused with N. mekongense (Hand.-Mazz.) Kosterm. Here, the complete plastid sequence of the N. delavayi was determined. The length of the plastid genome is 150,584 bp with overall AT content of 61%. It exhibited a typical quadripartite structure comprising a large single copy region (LSC) of 91,887 bp, a small single copy region (SSC) of 18,443 bp, and a pair of inverted repeat regions (IRs) of 20,262 bp each. Maximum likelihood phylogenetic analysis with GTR + F+R2 model was performed using eighteen complete plastomes of the Lauraceae, which strongly supports the relationships: sisterhood of the N. delavayi and a clade containing N. mekongense and N. lecomtei Liou. |
format | Online Article Text |
id | pubmed-7707612 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076122020-12-22 The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou Ren, Shulin Song, Yu Zhao, Meili Xu, Wenbin Mitochondrial DNA B Resour Mitogenome Announcement Neocinnamomum delavayi (Lec.) Liou is a kind of medicinal plants belonging to the genus Neocinnamomum H. Liu, but is often confused with N. mekongense (Hand.-Mazz.) Kosterm. Here, the complete plastid sequence of the N. delavayi was determined. The length of the plastid genome is 150,584 bp with overall AT content of 61%. It exhibited a typical quadripartite structure comprising a large single copy region (LSC) of 91,887 bp, a small single copy region (SSC) of 18,443 bp, and a pair of inverted repeat regions (IRs) of 20,262 bp each. Maximum likelihood phylogenetic analysis with GTR + F+R2 model was performed using eighteen complete plastomes of the Lauraceae, which strongly supports the relationships: sisterhood of the N. delavayi and a clade containing N. mekongense and N. lecomtei Liou. Taylor & Francis 2019-10-23 /pmc/articles/PMC7707612/ /pubmed/33366155 http://dx.doi.org/10.1080/23802359.2019.1679051 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Ren, Shulin Song, Yu Zhao, Meili Xu, Wenbin The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title | The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title_full | The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title_fullStr | The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title_full_unstemmed | The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title_short | The plastid genome sequence of Neocinnamomum delavayi (Lec.) Liou |
title_sort | plastid genome sequence of neocinnamomum delavayi (lec.) liou |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707612/ https://www.ncbi.nlm.nih.gov/pubmed/33366155 http://dx.doi.org/10.1080/23802359.2019.1679051 |
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