The complete chloroplast genome of Castanea crenata Sieb. & Zucc

The complete chloroplast genome sequence of Castanea crenata was sequenced and assembled using PacBio Sequel data. The cpDNA was 160,787 bp in length, containing a pair of inverted repeats (IRs) of 25,654 bp each separated by a large and small single copy (LSC and SSC) regions of 90,645 bp and 18,83...

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Autores principales: Kang, Min-Jeong, Kim, Tae-Dong, Lee, Sang-A, Lee, Hyo-Ryeon, Kim, Chulwoo, Lee, Hyoshin, Park, Eung-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707651/
https://www.ncbi.nlm.nih.gov/pubmed/33366224
http://dx.doi.org/10.1080/23802359.2019.1687038
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author Kang, Min-Jeong
Kim, Tae-Dong
Lee, Sang-A
Lee, Hyo-Ryeon
Kim, Chulwoo
Lee, Hyoshin
Park, Eung-Jun
author_facet Kang, Min-Jeong
Kim, Tae-Dong
Lee, Sang-A
Lee, Hyo-Ryeon
Kim, Chulwoo
Lee, Hyoshin
Park, Eung-Jun
author_sort Kang, Min-Jeong
collection PubMed
description The complete chloroplast genome sequence of Castanea crenata was sequenced and assembled using PacBio Sequel data. The cpDNA was 160,787 bp in length, containing a pair of inverted repeats (IRs) of 25,654 bp each separated by a large and small single copy (LSC and SSC) regions of 90,645 bp and 18,836 bp, respectively. The cpDNA contained 102 genes, including 65 protein-coding genes, 8 ribosomal RNA genes and 37 transfer RNA genes. Phylogenetic analysis indicated that C. crenata was closest to C. pumila var. pumila, which is known as a typical variety of American chinquapin or dwarf chestnut.
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spelling pubmed-77076512020-12-22 The complete chloroplast genome of Castanea crenata Sieb. & Zucc Kang, Min-Jeong Kim, Tae-Dong Lee, Sang-A Lee, Hyo-Ryeon Kim, Chulwoo Lee, Hyoshin Park, Eung-Jun Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Castanea crenata was sequenced and assembled using PacBio Sequel data. The cpDNA was 160,787 bp in length, containing a pair of inverted repeats (IRs) of 25,654 bp each separated by a large and small single copy (LSC and SSC) regions of 90,645 bp and 18,836 bp, respectively. The cpDNA contained 102 genes, including 65 protein-coding genes, 8 ribosomal RNA genes and 37 transfer RNA genes. Phylogenetic analysis indicated that C. crenata was closest to C. pumila var. pumila, which is known as a typical variety of American chinquapin or dwarf chestnut. Taylor & Francis 2019-11-08 /pmc/articles/PMC7707651/ /pubmed/33366224 http://dx.doi.org/10.1080/23802359.2019.1687038 Text en © 2019 National Institute of Forest Science. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Kang, Min-Jeong
Kim, Tae-Dong
Lee, Sang-A
Lee, Hyo-Ryeon
Kim, Chulwoo
Lee, Hyoshin
Park, Eung-Jun
The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title_full The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title_fullStr The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title_full_unstemmed The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title_short The complete chloroplast genome of Castanea crenata Sieb. & Zucc
title_sort complete chloroplast genome of castanea crenata sieb. & zucc
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707651/
https://www.ncbi.nlm.nih.gov/pubmed/33366224
http://dx.doi.org/10.1080/23802359.2019.1687038
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