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The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae)
Horsfieldia kingii is a member of Myristicaceae. The H. kingii chloroplast genome is found to be 155,655 bp in length and has a base composition of A (30.03%), G (19.52%), C (19.72%), and T (30.73%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separate...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707652/ https://www.ncbi.nlm.nih.gov/pubmed/33366374 http://dx.doi.org/10.1080/23802359.2019.1692722 |
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author | Li, Xiao-Qin Mao, Chang-Li Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu |
author_facet | Li, Xiao-Qin Mao, Chang-Li Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu |
author_sort | Li, Xiao-Qin |
collection | PubMed |
description | Horsfieldia kingii is a member of Myristicaceae. The H. kingii chloroplast genome is found to be 155,655 bp in length and has a base composition of A (30.03%), G (19.52%), C (19.72%), and T (30.73%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,912 bp) and a small single copy (SSC) region (20,691 bp). The genome encodes 123 unique genes, including 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of H. kingii was aligned together with other 2 species of Myristicaceae and other 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of H. kingii. |
format | Online Article Text |
id | pubmed-7707652 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076522020-12-22 The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) Li, Xiao-Qin Mao, Chang-Li Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu Mitochondrial DNA B Resour Mitogenome Announcement Horsfieldia kingii is a member of Myristicaceae. The H. kingii chloroplast genome is found to be 155,655 bp in length and has a base composition of A (30.03%), G (19.52%), C (19.72%), and T (30.73%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,912 bp) and a small single copy (SSC) region (20,691 bp). The genome encodes 123 unique genes, including 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of H. kingii was aligned together with other 2 species of Myristicaceae and other 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of H. kingii. Taylor & Francis 2019-11-22 /pmc/articles/PMC7707652/ /pubmed/33366374 http://dx.doi.org/10.1080/23802359.2019.1692722 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Xiao-Qin Mao, Chang-Li Zhang, Feng-Liang Yang, Tian Zhao, Qi Wu, Yu The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title | The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title_full | The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title_fullStr | The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title_short | The complete chloroplast genome sequence of Horsfieldia kingii (Myristicaceae) |
title_sort | complete chloroplast genome sequence of horsfieldia kingii (myristicaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707652/ https://www.ncbi.nlm.nih.gov/pubmed/33366374 http://dx.doi.org/10.1080/23802359.2019.1692722 |
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