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Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration
The aim of this study was to determine the complete mitochondrial genome (mitogenome) and the phylogenetic location of the Palaemonetes sinensis. The mitogenome was 15,736 bp in length, containing 22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), 2 ribosome RNA genes (rRNAs), and a cont...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707653/ https://www.ncbi.nlm.nih.gov/pubmed/33366392 http://dx.doi.org/10.1080/23802359.2019.1693934 |
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author | Li, Rui Mu, Xi-Dong Qin, Chuan-Jie Wang, Jun He, Yang Wen, Zheng-Yong |
author_facet | Li, Rui Mu, Xi-Dong Qin, Chuan-Jie Wang, Jun He, Yang Wen, Zheng-Yong |
author_sort | Li, Rui |
collection | PubMed |
description | The aim of this study was to determine the complete mitochondrial genome (mitogenome) and the phylogenetic location of the Palaemonetes sinensis. The mitogenome was 15,736 bp in length, containing 22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), 2 ribosome RNA genes (rRNAs), and a control region (CR). The overall nucleotide composition is as follows: A, 35.69%; C, 21.66%; G, 12.39%; T, 30.26%. Nine and four PCGs were encoded on the heavy and light strands, respectively. Phylogenetic analysis suggested that P. sinensis shares a close relationship with Palaemon serenus and Palaemon capensis. These findings are helpful for better understanding the phylogenetic relationship among Caridea, as well as investigating the population genetics of P. sinensis in the future. |
format | Online Article Text |
id | pubmed-7707653 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076532020-12-22 Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration Li, Rui Mu, Xi-Dong Qin, Chuan-Jie Wang, Jun He, Yang Wen, Zheng-Yong Mitochondrial DNA B Resour Mitogenome Announcement The aim of this study was to determine the complete mitochondrial genome (mitogenome) and the phylogenetic location of the Palaemonetes sinensis. The mitogenome was 15,736 bp in length, containing 22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), 2 ribosome RNA genes (rRNAs), and a control region (CR). The overall nucleotide composition is as follows: A, 35.69%; C, 21.66%; G, 12.39%; T, 30.26%. Nine and four PCGs were encoded on the heavy and light strands, respectively. Phylogenetic analysis suggested that P. sinensis shares a close relationship with Palaemon serenus and Palaemon capensis. These findings are helpful for better understanding the phylogenetic relationship among Caridea, as well as investigating the population genetics of P. sinensis in the future. Taylor & Francis 2019-11-22 /pmc/articles/PMC7707653/ /pubmed/33366392 http://dx.doi.org/10.1080/23802359.2019.1693934 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Rui Mu, Xi-Dong Qin, Chuan-Jie Wang, Jun He, Yang Wen, Zheng-Yong Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title | Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title_full | Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title_fullStr | Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title_full_unstemmed | Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title_short | Complete mitochondrial genome of Palaemonetes sinensis and its phylogenetic consideration |
title_sort | complete mitochondrial genome of palaemonetes sinensis and its phylogenetic consideration |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707653/ https://www.ncbi.nlm.nih.gov/pubmed/33366392 http://dx.doi.org/10.1080/23802359.2019.1693934 |
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