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The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position
The complete mitogenome of Smaragdina nigrifrons (GenBank accession number MN584924) is 15,903 bp in length, and includes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes, and a control region. The overall base composition was as follows: A, 38.18%; T, 35.25%; C,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707656/ https://www.ncbi.nlm.nih.gov/pubmed/33366280 http://dx.doi.org/10.1080/23802359.2019.1688710 |
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author | Yang, Wen-Jia Yan, Shu-Yan Jin, Dao-Chao |
author_facet | Yang, Wen-Jia Yan, Shu-Yan Jin, Dao-Chao |
author_sort | Yang, Wen-Jia |
collection | PubMed |
description | The complete mitogenome of Smaragdina nigrifrons (GenBank accession number MN584924) is 15,903 bp in length, and includes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes, and a control region. The overall base composition was as follows: A, 38.18%; T, 35.25%; C, 15.97%; and G, 10.60%, with a total of A + T content of 73.43%. Eleven reading frame overlaps and thirteen intergenic regions were found in the mitogenome of S. nigrifrons. All 13 PCGs are initiated with the typical ATN codons, and are terminated with either the complete TAA/TAG codons or a single T residue. All tRNAs possess the typical cloverleaf secondary structures except for trnS(1) (AGN). Phylogenetic analyses showed that S. nigrifrons was closely related to Cucujus clavipes, which was consistent with the conventional taxonomy. |
format | Online Article Text |
id | pubmed-7707656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076562020-12-22 The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position Yang, Wen-Jia Yan, Shu-Yan Jin, Dao-Chao Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome of Smaragdina nigrifrons (GenBank accession number MN584924) is 15,903 bp in length, and includes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes, and a control region. The overall base composition was as follows: A, 38.18%; T, 35.25%; C, 15.97%; and G, 10.60%, with a total of A + T content of 73.43%. Eleven reading frame overlaps and thirteen intergenic regions were found in the mitogenome of S. nigrifrons. All 13 PCGs are initiated with the typical ATN codons, and are terminated with either the complete TAA/TAG codons or a single T residue. All tRNAs possess the typical cloverleaf secondary structures except for trnS(1) (AGN). Phylogenetic analyses showed that S. nigrifrons was closely related to Cucujus clavipes, which was consistent with the conventional taxonomy. Taylor & Francis 2019-11-12 /pmc/articles/PMC7707656/ /pubmed/33366280 http://dx.doi.org/10.1080/23802359.2019.1688710 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Wen-Jia Yan, Shu-Yan Jin, Dao-Chao The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title | The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title_full | The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title_fullStr | The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title_full_unstemmed | The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title_short | The complete mitochondrial genome of Smaragdina nigrifrons (Coleoptera: Eumolpidae): characterization and phylogenetic position |
title_sort | complete mitochondrial genome of smaragdina nigrifrons (coleoptera: eumolpidae): characterization and phylogenetic position |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707656/ https://www.ncbi.nlm.nih.gov/pubmed/33366280 http://dx.doi.org/10.1080/23802359.2019.1688710 |
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