Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications

Celtis sinensis Pers. is a popular garden landscape tree in riparian areas and a valuable resistant tree in many extreme environments. Here, we determined the first complete chloroplast genome of C. sinensis using high-throughput sequencing technology. Our results showed the chloroplast genome of C....

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Autores principales: Wang, Guozheng, Zhang, Yunyan, Zhou, Jiehan, Zhang, Mengyuan, Hu, Yimin, Tian, Yongjing, Zhou, Jingbo, Wang, Zhongsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707679/
https://www.ncbi.nlm.nih.gov/pubmed/33366333
http://dx.doi.org/10.1080/23802359.2019.1692705
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author Wang, Guozheng
Zhang, Yunyan
Zhou, Jiehan
Zhang, Mengyuan
Hu, Yimin
Tian, Yongjing
Zhou, Jingbo
Wang, Zhongsheng
author_facet Wang, Guozheng
Zhang, Yunyan
Zhou, Jiehan
Zhang, Mengyuan
Hu, Yimin
Tian, Yongjing
Zhou, Jingbo
Wang, Zhongsheng
author_sort Wang, Guozheng
collection PubMed
description Celtis sinensis Pers. is a popular garden landscape tree in riparian areas and a valuable resistant tree in many extreme environments. Here, we determined the first complete chloroplast genome of C. sinensis using high-throughput sequencing technology. Our results showed the chloroplast genome of C.sinensis was 159,092 bp long and displayed a typical quadripartite structure consisting of a pair of inverted repeats with a length of 26,895 bp and separating by two single-copy regions (LSC, 86,085 bp and SSC, 19,217 bp). Besides, the chloroplast genome of C. sinensis totally contained 131 genes, including 87 protein coding genes, 36 transfer RNAs and eight ribosomal RNAs. Additionally, a maximum likelihood phylogenetic analysis based on the 19 chloroplast genomes demonstrated the monophyly of Cannabaceae and C. sinensis formed a sister clade to Celtis biondii.
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spelling pubmed-77076792020-12-22 Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications Wang, Guozheng Zhang, Yunyan Zhou, Jiehan Zhang, Mengyuan Hu, Yimin Tian, Yongjing Zhou, Jingbo Wang, Zhongsheng Mitochondrial DNA B Resour Mitogenome Announcement Celtis sinensis Pers. is a popular garden landscape tree in riparian areas and a valuable resistant tree in many extreme environments. Here, we determined the first complete chloroplast genome of C. sinensis using high-throughput sequencing technology. Our results showed the chloroplast genome of C.sinensis was 159,092 bp long and displayed a typical quadripartite structure consisting of a pair of inverted repeats with a length of 26,895 bp and separating by two single-copy regions (LSC, 86,085 bp and SSC, 19,217 bp). Besides, the chloroplast genome of C. sinensis totally contained 131 genes, including 87 protein coding genes, 36 transfer RNAs and eight ribosomal RNAs. Additionally, a maximum likelihood phylogenetic analysis based on the 19 chloroplast genomes demonstrated the monophyly of Cannabaceae and C. sinensis formed a sister clade to Celtis biondii. Taylor & Francis 2019-11-18 /pmc/articles/PMC7707679/ /pubmed/33366333 http://dx.doi.org/10.1080/23802359.2019.1692705 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Guozheng
Zhang, Yunyan
Zhou, Jiehan
Zhang, Mengyuan
Hu, Yimin
Tian, Yongjing
Zhou, Jingbo
Wang, Zhongsheng
Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title_full Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title_fullStr Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title_full_unstemmed Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title_short Characterization of the first complete chloroplast genome sequence of Celtis sinensis (Cannabaceae) and its phylogenetic implications
title_sort characterization of the first complete chloroplast genome sequence of celtis sinensis (cannabaceae) and its phylogenetic implications
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707679/
https://www.ncbi.nlm.nih.gov/pubmed/33366333
http://dx.doi.org/10.1080/23802359.2019.1692705
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