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The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)

Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals h...

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Autores principales: Figueroa, Diego Francisco, Hicks, David, Figueroa, Nicole Jewel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707681/
https://www.ncbi.nlm.nih.gov/pubmed/33366341
http://dx.doi.org/10.1080/23802359.2019.1692701
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author Figueroa, Diego Francisco
Hicks, David
Figueroa, Nicole Jewel
author_facet Figueroa, Diego Francisco
Hicks, David
Figueroa, Nicole Jewel
author_sort Figueroa, Diego Francisco
collection PubMed
description Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals have a completely sequenced mitochondrial genome. These were used to reconstruct the phylogeny for the order Antipatharia. The mitochondrial genome of T. thamnea is 17,712 base pairs and contains 13 protein-coding genes, 2 ribosomal RNAs, and 2 transfer RNAs in the following order: 16s RNA, COX3, COX1 (with intron), ND4L, COX2, ND4, ND6, ATP8, ATP6, and ND5 (with intron and copies of ND1 and ND3), tRNA-Trp, ND2, 12s RNA, CYTB, tRNA-Met. The gene arrangement is the same as that for Myriopathes japonica with a nearly identical sequence (99.35% identical). These results show that the mitochondrial genome within the family Myriopathidae is highly conserved.
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spelling pubmed-77076812020-12-22 The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) Figueroa, Diego Francisco Hicks, David Figueroa, Nicole Jewel Mitochondrial DNA B Resour Mitogenome Announcement Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals have a completely sequenced mitochondrial genome. These were used to reconstruct the phylogeny for the order Antipatharia. The mitochondrial genome of T. thamnea is 17,712 base pairs and contains 13 protein-coding genes, 2 ribosomal RNAs, and 2 transfer RNAs in the following order: 16s RNA, COX3, COX1 (with intron), ND4L, COX2, ND4, ND6, ATP8, ATP6, and ND5 (with intron and copies of ND1 and ND3), tRNA-Trp, ND2, 12s RNA, CYTB, tRNA-Met. The gene arrangement is the same as that for Myriopathes japonica with a nearly identical sequence (99.35% identical). These results show that the mitochondrial genome within the family Myriopathidae is highly conserved. Taylor & Francis 2019-11-20 /pmc/articles/PMC7707681/ /pubmed/33366341 http://dx.doi.org/10.1080/23802359.2019.1692701 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Figueroa, Diego Francisco
Hicks, David
Figueroa, Nicole Jewel
The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title_full The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title_fullStr The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title_full_unstemmed The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title_short The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
title_sort complete mitochondrial genome of tanacetipathes thamnea warner, 1981 (antipatharia: myriopathidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707681/
https://www.ncbi.nlm.nih.gov/pubmed/33366341
http://dx.doi.org/10.1080/23802359.2019.1692701
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