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The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae)
Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals h...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707681/ https://www.ncbi.nlm.nih.gov/pubmed/33366341 http://dx.doi.org/10.1080/23802359.2019.1692701 |
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author | Figueroa, Diego Francisco Hicks, David Figueroa, Nicole Jewel |
author_facet | Figueroa, Diego Francisco Hicks, David Figueroa, Nicole Jewel |
author_sort | Figueroa, Diego Francisco |
collection | PubMed |
description | Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals have a completely sequenced mitochondrial genome. These were used to reconstruct the phylogeny for the order Antipatharia. The mitochondrial genome of T. thamnea is 17,712 base pairs and contains 13 protein-coding genes, 2 ribosomal RNAs, and 2 transfer RNAs in the following order: 16s RNA, COX3, COX1 (with intron), ND4L, COX2, ND4, ND6, ATP8, ATP6, and ND5 (with intron and copies of ND1 and ND3), tRNA-Trp, ND2, 12s RNA, CYTB, tRNA-Met. The gene arrangement is the same as that for Myriopathes japonica with a nearly identical sequence (99.35% identical). These results show that the mitochondrial genome within the family Myriopathidae is highly conserved. |
format | Online Article Text |
id | pubmed-7707681 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076812020-12-22 The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) Figueroa, Diego Francisco Hicks, David Figueroa, Nicole Jewel Mitochondrial DNA B Resour Mitogenome Announcement Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals have a completely sequenced mitochondrial genome. These were used to reconstruct the phylogeny for the order Antipatharia. The mitochondrial genome of T. thamnea is 17,712 base pairs and contains 13 protein-coding genes, 2 ribosomal RNAs, and 2 transfer RNAs in the following order: 16s RNA, COX3, COX1 (with intron), ND4L, COX2, ND4, ND6, ATP8, ATP6, and ND5 (with intron and copies of ND1 and ND3), tRNA-Trp, ND2, 12s RNA, CYTB, tRNA-Met. The gene arrangement is the same as that for Myriopathes japonica with a nearly identical sequence (99.35% identical). These results show that the mitochondrial genome within the family Myriopathidae is highly conserved. Taylor & Francis 2019-11-20 /pmc/articles/PMC7707681/ /pubmed/33366341 http://dx.doi.org/10.1080/23802359.2019.1692701 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Figueroa, Diego Francisco Hicks, David Figueroa, Nicole Jewel The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title | The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title_full | The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title_fullStr | The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title_full_unstemmed | The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title_short | The complete mitochondrial genome of Tanacetipathes thamnea Warner, 1981 (Antipatharia: Myriopathidae) |
title_sort | complete mitochondrial genome of tanacetipathes thamnea warner, 1981 (antipatharia: myriopathidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707681/ https://www.ncbi.nlm.nih.gov/pubmed/33366341 http://dx.doi.org/10.1080/23802359.2019.1692701 |
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