Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)

The complete mitogenome of Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae) was determined in this study. The total length of mitogenome was 15,839 bp, and contained 13 protein-coding genes, 21 tRNA genes, 2 rRNA genes, 1 control region, and 2 unknown fragments which longer than 200 bp. The nucleot...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Mingliu, Gao, Tingwei, Hui, Ding, Chen, Xiao, Liu, Wenai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707692/
https://www.ncbi.nlm.nih.gov/pubmed/33366240
http://dx.doi.org/10.1080/23802359.2019.1687350
_version_ 1783617406131765248
author Yang, Mingliu
Gao, Tingwei
Hui, Ding
Chen, Xiao
Liu, Wenai
author_facet Yang, Mingliu
Gao, Tingwei
Hui, Ding
Chen, Xiao
Liu, Wenai
author_sort Yang, Mingliu
collection PubMed
description The complete mitogenome of Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae) was determined in this study. The total length of mitogenome was 15,839 bp, and contained 13 protein-coding genes, 21 tRNA genes, 2 rRNA genes, 1 control region, and 2 unknown fragments which longer than 200 bp. The nucleotide composition was 25.80% A, 16.56% C, 25.94% G and 31.67% T. Six initiation codons (ATA, ATC, ATG, ATT, ACG, GTG) and three termination codons (TAA, TAG, TA–) were used in the protein-coding genes. The length of tRNA genes ranged from 52 to 65 bp, and tRNA-Arg was not identified. The phylogenetic result showed Sphaeroma sp. was closely related to Sphaeroma terebrans with high bootstrap value supported.
format Online
Article
Text
id pubmed-7707692
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77076922020-12-22 Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae) Yang, Mingliu Gao, Tingwei Hui, Ding Chen, Xiao Liu, Wenai Mitochondrial DNA B Resour Mitogenome Announcement The complete mitogenome of Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae) was determined in this study. The total length of mitogenome was 15,839 bp, and contained 13 protein-coding genes, 21 tRNA genes, 2 rRNA genes, 1 control region, and 2 unknown fragments which longer than 200 bp. The nucleotide composition was 25.80% A, 16.56% C, 25.94% G and 31.67% T. Six initiation codons (ATA, ATC, ATG, ATT, ACG, GTG) and three termination codons (TAA, TAG, TA–) were used in the protein-coding genes. The length of tRNA genes ranged from 52 to 65 bp, and tRNA-Arg was not identified. The phylogenetic result showed Sphaeroma sp. was closely related to Sphaeroma terebrans with high bootstrap value supported. Taylor & Francis 2019-11-08 /pmc/articles/PMC7707692/ /pubmed/33366240 http://dx.doi.org/10.1080/23802359.2019.1687350 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Mingliu
Gao, Tingwei
Hui, Ding
Chen, Xiao
Liu, Wenai
Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title_full Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title_fullStr Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title_full_unstemmed Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title_short Complete mitochondrial genome and the phylogenetic position of the Sphaeroma sp. (Crustacea, Isopod, Sphaeromatidae)
title_sort complete mitochondrial genome and the phylogenetic position of the sphaeroma sp. (crustacea, isopod, sphaeromatidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707692/
https://www.ncbi.nlm.nih.gov/pubmed/33366240
http://dx.doi.org/10.1080/23802359.2019.1687350
work_keys_str_mv AT yangmingliu completemitochondrialgenomeandthephylogeneticpositionofthesphaeromaspcrustaceaisopodsphaeromatidae
AT gaotingwei completemitochondrialgenomeandthephylogeneticpositionofthesphaeromaspcrustaceaisopodsphaeromatidae
AT huiding completemitochondrialgenomeandthephylogeneticpositionofthesphaeromaspcrustaceaisopodsphaeromatidae
AT chenxiao completemitochondrialgenomeandthephylogeneticpositionofthesphaeromaspcrustaceaisopodsphaeromatidae
AT liuwenai completemitochondrialgenomeandthephylogeneticpositionofthesphaeromaspcrustaceaisopodsphaeromatidae

Ejemplares similares