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First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida)
In this study, the complete mitochondrial genome of the Aphrodita australis was sequenced. The complete mitochondrial genome was circular and 15,288 bp in length, consisted of a typical set of 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and 1 non-codin...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707694/ https://www.ncbi.nlm.nih.gov/pubmed/33366344 http://dx.doi.org/10.1080/23802359.2019.1692712 |
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author | Wang, Zongxing Li, Xiuqi Xu, Zongjun Liu, Hongzhan Wang, Yanan Zheng, Fengrong |
author_facet | Wang, Zongxing Li, Xiuqi Xu, Zongjun Liu, Hongzhan Wang, Yanan Zheng, Fengrong |
author_sort | Wang, Zongxing |
collection | PubMed |
description | In this study, the complete mitochondrial genome of the Aphrodita australis was sequenced. The complete mitochondrial genome was circular and 15,288 bp in length, consisted of a typical set of 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and 1 non-coding control region. All these genes are in the heavy strand. The non-coding control region is 672 bp in length, and located between tRNA-Ser and tRNA-Leu. The overall nucleotides base composition of the heavy strand is 31.02% for A, 22.76% for C, 12.49% for G, and 33.73% for T, with a slight A + T-rich feature (64.75%). All of the PCGs begin with ATG as their start codon and the cox 3, cytb and nad 3 are terminated with TAA, atp8, nad4, nad 4l, and nad 6 are terminated with TAG, while others are terminated by incomplete codon T. Seen from the phylogenetic tree, A. australis has a more close relationship with Goniada japonica than other species. |
format | Online Article Text |
id | pubmed-7707694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77076942020-12-22 First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) Wang, Zongxing Li, Xiuqi Xu, Zongjun Liu, Hongzhan Wang, Yanan Zheng, Fengrong Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of the Aphrodita australis was sequenced. The complete mitochondrial genome was circular and 15,288 bp in length, consisted of a typical set of 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and 1 non-coding control region. All these genes are in the heavy strand. The non-coding control region is 672 bp in length, and located between tRNA-Ser and tRNA-Leu. The overall nucleotides base composition of the heavy strand is 31.02% for A, 22.76% for C, 12.49% for G, and 33.73% for T, with a slight A + T-rich feature (64.75%). All of the PCGs begin with ATG as their start codon and the cox 3, cytb and nad 3 are terminated with TAA, atp8, nad4, nad 4l, and nad 6 are terminated with TAG, while others are terminated by incomplete codon T. Seen from the phylogenetic tree, A. australis has a more close relationship with Goniada japonica than other species. Taylor & Francis 2019-11-20 /pmc/articles/PMC7707694/ /pubmed/33366344 http://dx.doi.org/10.1080/23802359.2019.1692712 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Zongxing Li, Xiuqi Xu, Zongjun Liu, Hongzhan Wang, Yanan Zheng, Fengrong First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title | First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title_full | First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title_fullStr | First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title_full_unstemmed | First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title_short | First report of the complete mitochondrial genome and phylogenetic analysis of Aphrodita australis (Aphroditidae, Annelida) |
title_sort | first report of the complete mitochondrial genome and phylogenetic analysis of aphrodita australis (aphroditidae, annelida) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707694/ https://www.ncbi.nlm.nih.gov/pubmed/33366344 http://dx.doi.org/10.1080/23802359.2019.1692712 |
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