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The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant

The chloroplast (cp) genome of natural male mutant Cymbidium tortisepalum ‘Guanshihe’ has been characterized using Illumina pair-end sequencing technology. The complete cp genome was 149,830 bp in length, containing a large single-copy region (LSC) of 85,131 bp and a small single-copy region (SSC) o...

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Autores principales: Sun, Yangna, Chen, Yanqiong, Lin, Han, Ma, Xiaokai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707707/
https://www.ncbi.nlm.nih.gov/pubmed/33366331
http://dx.doi.org/10.1080/23802359.2019.1691948
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author Sun, Yangna
Chen, Yanqiong
Lin, Han
Ma, Xiaokai
author_facet Sun, Yangna
Chen, Yanqiong
Lin, Han
Ma, Xiaokai
author_sort Sun, Yangna
collection PubMed
description The chloroplast (cp) genome of natural male mutant Cymbidium tortisepalum ‘Guanshihe’ has been characterized using Illumina pair-end sequencing technology. The complete cp genome was 149,830 bp in length, containing a large single-copy region (LSC) of 85,131 bp and a small single-copy region (SSC) of 13,275 bp, which were separated by a pair of 25,712 bp inverted repeat regions (IRs). The genome contained 130 genes, with 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content is 37.09% with the values of the LSC, SSC, and IR regions are 34.40%, 29.63%, and 43.45%, respectively. Further, phylogenetic analysis suggested that the plastome of C. tortisepalum male mutant ‘Guanshihe’ is close to sequenced C. sinense, C. kanran, C. tortisepalum, and C. ensifolium plastomes.
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spelling pubmed-77077072020-12-22 The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant Sun, Yangna Chen, Yanqiong Lin, Han Ma, Xiaokai Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast (cp) genome of natural male mutant Cymbidium tortisepalum ‘Guanshihe’ has been characterized using Illumina pair-end sequencing technology. The complete cp genome was 149,830 bp in length, containing a large single-copy region (LSC) of 85,131 bp and a small single-copy region (SSC) of 13,275 bp, which were separated by a pair of 25,712 bp inverted repeat regions (IRs). The genome contained 130 genes, with 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content is 37.09% with the values of the LSC, SSC, and IR regions are 34.40%, 29.63%, and 43.45%, respectively. Further, phylogenetic analysis suggested that the plastome of C. tortisepalum male mutant ‘Guanshihe’ is close to sequenced C. sinense, C. kanran, C. tortisepalum, and C. ensifolium plastomes. Taylor & Francis 2019-11-18 /pmc/articles/PMC7707707/ /pubmed/33366331 http://dx.doi.org/10.1080/23802359.2019.1691948 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Sun, Yangna
Chen, Yanqiong
Lin, Han
Ma, Xiaokai
The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title_full The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title_fullStr The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title_full_unstemmed The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title_short The complete chloroplast genome of a Cymbidium Tortisepalum (Orchidaceae) male mutant
title_sort complete chloroplast genome of a cymbidium tortisepalum (orchidaceae) male mutant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707707/
https://www.ncbi.nlm.nih.gov/pubmed/33366331
http://dx.doi.org/10.1080/23802359.2019.1691948
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