The complete chloroplast genome of Parnassia wightiana (Celastraceae)

The infrageneric relationships of the genus Parnassia were not clearly identified due to limited available genetic data. In this study, we presented the complete chloroplast genome of Parnassia wightiana for future phylogenetic study. The plastome of P. wightiana was 152,043 bp in length, with a lar...

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Autores principales: Li, Jianfang, Yang, Qian, Xu, Bei, Liu, Zhan-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707725/
https://www.ncbi.nlm.nih.gov/pubmed/33366283
http://dx.doi.org/10.1080/23802359.2019.1688700
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author Li, Jianfang
Yang, Qian
Xu, Bei
Liu, Zhan-Lin
author_facet Li, Jianfang
Yang, Qian
Xu, Bei
Liu, Zhan-Lin
author_sort Li, Jianfang
collection PubMed
description The infrageneric relationships of the genus Parnassia were not clearly identified due to limited available genetic data. In this study, we presented the complete chloroplast genome of Parnassia wightiana for future phylogenetic study. The plastome of P. wightiana was 152,043 bp in length, with a large single-copy region (LSC) of 82,737 bp and a small single-copy region (SSC) of 19,030 bp, separated by a pair of inverted repeat regions (IRs) of 25,138 bp. It contained 134 genes, including 87 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 2 pseudogenes. The overall GC content was 37.1%, while the corresponding values in the LSC, SSC, and IR region were 35.0%, 30.8%, and 42.9%, respectively. The phylogenetic analysis supported the monophyly of Parnassia.
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spelling pubmed-77077252020-12-22 The complete chloroplast genome of Parnassia wightiana (Celastraceae) Li, Jianfang Yang, Qian Xu, Bei Liu, Zhan-Lin Mitochondrial DNA B Resour Mitogenome Announcement The infrageneric relationships of the genus Parnassia were not clearly identified due to limited available genetic data. In this study, we presented the complete chloroplast genome of Parnassia wightiana for future phylogenetic study. The plastome of P. wightiana was 152,043 bp in length, with a large single-copy region (LSC) of 82,737 bp and a small single-copy region (SSC) of 19,030 bp, separated by a pair of inverted repeat regions (IRs) of 25,138 bp. It contained 134 genes, including 87 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 2 pseudogenes. The overall GC content was 37.1%, while the corresponding values in the LSC, SSC, and IR region were 35.0%, 30.8%, and 42.9%, respectively. The phylogenetic analysis supported the monophyly of Parnassia. Taylor & Francis 2019-11-13 /pmc/articles/PMC7707725/ /pubmed/33366283 http://dx.doi.org/10.1080/23802359.2019.1688700 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Jianfang
Yang, Qian
Xu, Bei
Liu, Zhan-Lin
The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title_full The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title_fullStr The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title_full_unstemmed The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title_short The complete chloroplast genome of Parnassia wightiana (Celastraceae)
title_sort complete chloroplast genome of parnassia wightiana (celastraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707725/
https://www.ncbi.nlm.nih.gov/pubmed/33366283
http://dx.doi.org/10.1080/23802359.2019.1688700
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