Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia

The complete chloroplast genome sequences of the hot desert herb Fagonia indica (Zygophyllaceae) is being reported in this study. The total plastome length was 128,379 bp (GC content 34.02%). The gene order in F. indica was found similar to the angiosperm except for the loss of one copy of the IR an...

Descripción completa

Detalles Bibliográficos
Autores principales: Ali, Mohammad Ajmal, Elshikh, Mohammad S., Kim, Soo-Yong, Al-Hemaid, Fahad, Lee, Joongku, Lama, Dorjay, Chhetri, Abhijit, Pan, Tapan Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707728/
https://www.ncbi.nlm.nih.gov/pubmed/33366244
http://dx.doi.org/10.1080/23802359.2019.1687358
_version_ 1783617414535053312
author Ali, Mohammad Ajmal
Elshikh, Mohammad S.
Kim, Soo-Yong
Al-Hemaid, Fahad
Lee, Joongku
Lama, Dorjay
Chhetri, Abhijit
Pan, Tapan Kumar
author_facet Ali, Mohammad Ajmal
Elshikh, Mohammad S.
Kim, Soo-Yong
Al-Hemaid, Fahad
Lee, Joongku
Lama, Dorjay
Chhetri, Abhijit
Pan, Tapan Kumar
author_sort Ali, Mohammad Ajmal
collection PubMed
description The complete chloroplast genome sequences of the hot desert herb Fagonia indica (Zygophyllaceae) is being reported in this study. The total plastome length was 128,379 bp (GC content 34.02%). The gene order in F. indica was found similar to the angiosperm except for the loss of one copy of the IR and by the presence of a single, large inversion that reverses the order of the genes between rbcL and rps16. A total number of 115 unique coding genes which includes 80 protein-coding gene, 31 tRNA genes, and 4 rRNA genes were annotated. The phylogenetic analysis of representative plastomes from the Roisds revealed two distinct clades of Krameriaceae and Zygophyllaceae.
format Online
Article
Text
id pubmed-7707728
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77077282020-12-22 Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia Ali, Mohammad Ajmal Elshikh, Mohammad S. Kim, Soo-Yong Al-Hemaid, Fahad Lee, Joongku Lama, Dorjay Chhetri, Abhijit Pan, Tapan Kumar Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequences of the hot desert herb Fagonia indica (Zygophyllaceae) is being reported in this study. The total plastome length was 128,379 bp (GC content 34.02%). The gene order in F. indica was found similar to the angiosperm except for the loss of one copy of the IR and by the presence of a single, large inversion that reverses the order of the genes between rbcL and rps16. A total number of 115 unique coding genes which includes 80 protein-coding gene, 31 tRNA genes, and 4 rRNA genes were annotated. The phylogenetic analysis of representative plastomes from the Roisds revealed two distinct clades of Krameriaceae and Zygophyllaceae. Taylor & Francis 2019-11-08 /pmc/articles/PMC7707728/ /pubmed/33366244 http://dx.doi.org/10.1080/23802359.2019.1687358 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Ali, Mohammad Ajmal
Elshikh, Mohammad S.
Kim, Soo-Yong
Al-Hemaid, Fahad
Lee, Joongku
Lama, Dorjay
Chhetri, Abhijit
Pan, Tapan Kumar
Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title_full Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title_fullStr Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title_full_unstemmed Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title_short Complete chloroplast genome of the hot desert herb Fagonia indica (Zygophyllaceae) from south-central Arabia
title_sort complete chloroplast genome of the hot desert herb fagonia indica (zygophyllaceae) from south-central arabia
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707728/
https://www.ncbi.nlm.nih.gov/pubmed/33366244
http://dx.doi.org/10.1080/23802359.2019.1687358
work_keys_str_mv AT alimohammadajmal completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT elshikhmohammads completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT kimsooyong completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT alhemaidfahad completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT leejoongku completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT lamadorjay completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT chhetriabhijit completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia
AT pantapankumar completechloroplastgenomeofthehotdesertherbfagoniaindicazygophyllaceaefromsouthcentralarabia

Ejemplares similares