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Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant

Paederia scandens has been used as a traditional medicine in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. The complete chloroplast (cp) genome sequence of P. scandens was reported and characterized in this study. The cp genome is 153,626 bp in length, composed of a pair...

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Autores principales: Li, Zheng-Hui, Ye, Ke, Lv, Xiao, Zhang, Xian, Ling, Li-Zhen, Ai, Hong-Lian, Zhang, Shu-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707732/
https://www.ncbi.nlm.nih.gov/pubmed/33366325
http://dx.doi.org/10.1080/23802359.2019.1691068
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author Li, Zheng-Hui
Ye, Ke
Lv, Xiao
Zhang, Xian
Ling, Li-Zhen
Ai, Hong-Lian
Zhang, Shu-Dong
author_facet Li, Zheng-Hui
Ye, Ke
Lv, Xiao
Zhang, Xian
Ling, Li-Zhen
Ai, Hong-Lian
Zhang, Shu-Dong
author_sort Li, Zheng-Hui
collection PubMed
description Paederia scandens has been used as a traditional medicine in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. The complete chloroplast (cp) genome sequence of P. scandens was reported and characterized in this study. The cp genome is 153,626 bp in length, composed of a pair of 26,513 bp inverted repeat (IR) regions separated by a large single-copy (LSC) region of 83,712 bp and a small single-copy (SSC) region of 16,888 bp. There were 131 predicted genes (86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 37.7%. Phylogenetic analysis based on the cp genome data showed that P. scandens was sister to the clade formed by Galium mollugo and G. aparine.
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spelling pubmed-77077322020-12-22 Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant Li, Zheng-Hui Ye, Ke Lv, Xiao Zhang, Xian Ling, Li-Zhen Ai, Hong-Lian Zhang, Shu-Dong Mitochondrial DNA B Resour Mitogenome Announcement Paederia scandens has been used as a traditional medicine in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. The complete chloroplast (cp) genome sequence of P. scandens was reported and characterized in this study. The cp genome is 153,626 bp in length, composed of a pair of 26,513 bp inverted repeat (IR) regions separated by a large single-copy (LSC) region of 83,712 bp and a small single-copy (SSC) region of 16,888 bp. There were 131 predicted genes (86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 37.7%. Phylogenetic analysis based on the cp genome data showed that P. scandens was sister to the clade formed by Galium mollugo and G. aparine. Taylor & Francis 2019-11-18 /pmc/articles/PMC7707732/ /pubmed/33366325 http://dx.doi.org/10.1080/23802359.2019.1691068 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Zheng-Hui
Ye, Ke
Lv, Xiao
Zhang, Xian
Ling, Li-Zhen
Ai, Hong-Lian
Zhang, Shu-Dong
Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title_full Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title_fullStr Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title_full_unstemmed Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title_short Characterization of the complete chloroplast genome of Paederia scandens (Rubiaceae): a Chinese folk medicinal plant
title_sort characterization of the complete chloroplast genome of paederia scandens (rubiaceae): a chinese folk medicinal plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707732/
https://www.ncbi.nlm.nih.gov/pubmed/33366325
http://dx.doi.org/10.1080/23802359.2019.1691068
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