Cargando…

Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China

Swertia mileensis is an important medicinal plant endemic to South-east Yunnan, China, which has been widely used to treat icteric hepatitis. The complete chloroplast genome sequence of S. mileensis is presented in this study, the total size is 153,015 bp in length with a typical quadripartite struc...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Cong-Wei, Liu, Ying-Ying, Zhang, Ying-Min, Ma, Xiao-Hui, Qian, Zi-Gang, Li, Guo-Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707743/
https://www.ncbi.nlm.nih.gov/pubmed/33366365
http://dx.doi.org/10.1080/23802359.2019.1693303
_version_ 1783617418133766144
author Yang, Cong-Wei
Liu, Ying-Ying
Zhang, Ying-Min
Ma, Xiao-Hui
Qian, Zi-Gang
Li, Guo-Dong
author_facet Yang, Cong-Wei
Liu, Ying-Ying
Zhang, Ying-Min
Ma, Xiao-Hui
Qian, Zi-Gang
Li, Guo-Dong
author_sort Yang, Cong-Wei
collection PubMed
description Swertia mileensis is an important medicinal plant endemic to South-east Yunnan, China, which has been widely used to treat icteric hepatitis. The complete chloroplast genome sequence of S. mileensis is presented in this study, the total size is 153,015 bp in length with a typical quadripartite structure including a pair of inverted repeat (IRs, 25,786 bp) regions separated by a large single copy (LSC, 83,048 bp) region and a small single copy (SSC, 18,395 bp) region. The overall GC content of it is 38.2%. The cp genome has 134 annotated genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Among these genes, nine genes have one intron and two genes contain two introns. The phylogenetic tree based on 16 complete plastomes of support close relationships among two species of Swertia with 100% bootstrap value.
format Online
Article
Text
id pubmed-7707743
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77077432020-12-22 Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China Yang, Cong-Wei Liu, Ying-Ying Zhang, Ying-Min Ma, Xiao-Hui Qian, Zi-Gang Li, Guo-Dong Mitochondrial DNA B Resour Mitogenome Announcement Swertia mileensis is an important medicinal plant endemic to South-east Yunnan, China, which has been widely used to treat icteric hepatitis. The complete chloroplast genome sequence of S. mileensis is presented in this study, the total size is 153,015 bp in length with a typical quadripartite structure including a pair of inverted repeat (IRs, 25,786 bp) regions separated by a large single copy (LSC, 83,048 bp) region and a small single copy (SSC, 18,395 bp) region. The overall GC content of it is 38.2%. The cp genome has 134 annotated genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Among these genes, nine genes have one intron and two genes contain two introns. The phylogenetic tree based on 16 complete plastomes of support close relationships among two species of Swertia with 100% bootstrap value. Taylor & Francis 2019-11-20 /pmc/articles/PMC7707743/ /pubmed/33366365 http://dx.doi.org/10.1080/23802359.2019.1693303 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Cong-Wei
Liu, Ying-Ying
Zhang, Ying-Min
Ma, Xiao-Hui
Qian, Zi-Gang
Li, Guo-Dong
Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title_full Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title_fullStr Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title_full_unstemmed Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title_short Complete chloroplast genome sequence of Swertia mileensis (Gentianaceae): a medicinal species endemic to China
title_sort complete chloroplast genome sequence of swertia mileensis (gentianaceae): a medicinal species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707743/
https://www.ncbi.nlm.nih.gov/pubmed/33366365
http://dx.doi.org/10.1080/23802359.2019.1693303
work_keys_str_mv AT yangcongwei completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina
AT liuyingying completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina
AT zhangyingmin completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina
AT maxiaohui completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina
AT qianzigang completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina
AT liguodong completechloroplastgenomesequenceofswertiamileensisgentianaceaeamedicinalspeciesendemictochina