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The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae)
Rheum tanguticum is a valuable medicinal plant endemic to the Qinghai-Tibetan Plateau. It has been listed classified under the IUCN Red List categories of Vulnerable due to the low reproductive rate and heavy exploitation. In this study, the complete chloroplast (cp) genome of R. tanguticum has been...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707752/ https://www.ncbi.nlm.nih.gov/pubmed/33366315 http://dx.doi.org/10.1080/23802359.2019.1688722 |
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author | Huo, Xiaowei Wei, Hao Gao, Jing Yan, Yonggang Zhang, Gang Liu, Mengmeng |
author_facet | Huo, Xiaowei Wei, Hao Gao, Jing Yan, Yonggang Zhang, Gang Liu, Mengmeng |
author_sort | Huo, Xiaowei |
collection | PubMed |
description | Rheum tanguticum is a valuable medicinal plant endemic to the Qinghai-Tibetan Plateau. It has been listed classified under the IUCN Red List categories of Vulnerable due to the low reproductive rate and heavy exploitation. In this study, the complete chloroplast (cp) genome of R. tanguticum has been assembled using data from the whole-genome Illumina sequencing. The cp genome is 161,515 bp in size and contains two inverted repeat regions of 30,823 bp each, which is separated by a large single-copy region of 86,675 bp and a small single-copy region of 13,194 bp. The cp genome contains 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that the cp genome of R. tanguticum was closely related to that of the R. palmatum. |
format | Online Article Text |
id | pubmed-7707752 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77077522020-12-22 The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) Huo, Xiaowei Wei, Hao Gao, Jing Yan, Yonggang Zhang, Gang Liu, Mengmeng Mitochondrial DNA B Resour Mitogenome Announcement Rheum tanguticum is a valuable medicinal plant endemic to the Qinghai-Tibetan Plateau. It has been listed classified under the IUCN Red List categories of Vulnerable due to the low reproductive rate and heavy exploitation. In this study, the complete chloroplast (cp) genome of R. tanguticum has been assembled using data from the whole-genome Illumina sequencing. The cp genome is 161,515 bp in size and contains two inverted repeat regions of 30,823 bp each, which is separated by a large single-copy region of 86,675 bp and a small single-copy region of 13,194 bp. The cp genome contains 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that the cp genome of R. tanguticum was closely related to that of the R. palmatum. Taylor & Francis 2019-11-13 /pmc/articles/PMC7707752/ /pubmed/33366315 http://dx.doi.org/10.1080/23802359.2019.1688722 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Huo, Xiaowei Wei, Hao Gao, Jing Yan, Yonggang Zhang, Gang Liu, Mengmeng The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title | The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title_full | The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title_fullStr | The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title_short | The complete chloroplast genome sequence of Rheum tanguticum, an endangered Chinese medicinal plant (Polygonaceae) |
title_sort | complete chloroplast genome sequence of rheum tanguticum, an endangered chinese medicinal plant (polygonaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707752/ https://www.ncbi.nlm.nih.gov/pubmed/33366315 http://dx.doi.org/10.1080/23802359.2019.1688722 |
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