Cargando…

Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China

Sophora moorcroftiana, an endemic Fabaceae species occurred in the Qinghai-Tibet plateau, China, has important economic value in local. Its completed plastome sequence is 148,930 bp in size, and comprises a pair of inverted repeat (IR) regions of 23,787 bp each, a large single-copy region of 83,342 ...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Huie, Yang, Lan, Li, Qian, Li, Jiangrong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707758/
https://www.ncbi.nlm.nih.gov/pubmed/33366373
http://dx.doi.org/10.1080/23802359.2019.1692713
_version_ 1783617421595115520
author Li, Huie
Yang, Lan
Li, Qian
Li, Jiangrong
author_facet Li, Huie
Yang, Lan
Li, Qian
Li, Jiangrong
author_sort Li, Huie
collection PubMed
description Sophora moorcroftiana, an endemic Fabaceae species occurred in the Qinghai-Tibet plateau, China, has important economic value in local. Its completed plastome sequence is 148,930 bp in size, and comprises a pair of inverted repeat (IR) regions of 23,787 bp each, a large single-copy region of 83,342 bp and a small single-copy region of 18,014 bp. The GC content of the plastome was 30.2%. A total of 124 genes were identified, comprising 80 protein-coding genes, 36 tRNA genes and eight rRNA genes. There are 94 unique genes, with 15 genes duplicated in the IR regions. Phylogenetic tree shows that plastome of S. moorcroftiana is most related to that of S. alopecuroides. This plastome would be helpful for the study of molecular mechanism of photosynthesis, sustainable conservation, genetic improvement of S. moorcroftiana.
format Online
Article
Text
id pubmed-7707758
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77077582020-12-22 Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China Li, Huie Yang, Lan Li, Qian Li, Jiangrong Mitochondrial DNA B Resour Mitogenome Announcement Sophora moorcroftiana, an endemic Fabaceae species occurred in the Qinghai-Tibet plateau, China, has important economic value in local. Its completed plastome sequence is 148,930 bp in size, and comprises a pair of inverted repeat (IR) regions of 23,787 bp each, a large single-copy region of 83,342 bp and a small single-copy region of 18,014 bp. The GC content of the plastome was 30.2%. A total of 124 genes were identified, comprising 80 protein-coding genes, 36 tRNA genes and eight rRNA genes. There are 94 unique genes, with 15 genes duplicated in the IR regions. Phylogenetic tree shows that plastome of S. moorcroftiana is most related to that of S. alopecuroides. This plastome would be helpful for the study of molecular mechanism of photosynthesis, sustainable conservation, genetic improvement of S. moorcroftiana. Taylor & Francis 2019-11-21 /pmc/articles/PMC7707758/ /pubmed/33366373 http://dx.doi.org/10.1080/23802359.2019.1692713 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Huie
Yang, Lan
Li, Qian
Li, Jiangrong
Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title_full Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title_fullStr Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title_full_unstemmed Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title_short Completed plastome sequence of Sophora moorcroftiana, an endemic shrub to the Qinghai-Tibet Plateau, China
title_sort completed plastome sequence of sophora moorcroftiana, an endemic shrub to the qinghai-tibet plateau, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707758/
https://www.ncbi.nlm.nih.gov/pubmed/33366373
http://dx.doi.org/10.1080/23802359.2019.1692713
work_keys_str_mv AT lihuie completedplastomesequenceofsophoramoorcroftianaanendemicshrubtotheqinghaitibetplateauchina
AT yanglan completedplastomesequenceofsophoramoorcroftianaanendemicshrubtotheqinghaitibetplateauchina
AT liqian completedplastomesequenceofsophoramoorcroftianaanendemicshrubtotheqinghaitibetplateauchina
AT lijiangrong completedplastomesequenceofsophoramoorcroftianaanendemicshrubtotheqinghaitibetplateauchina