Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis

Rauvolfia verticillata is a medical plant (Apocynaceae) widely distributed from India to China, the Indo-China Peninsula, Indonesia, and the Philippines. The first complete plastid genome sequence of the species reported here was 155,856 bp in length, with the large single-copy (LSC) region of 86,08...

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Detalles Bibliográficos
Autores principales: Chen, Wenna, Liang, Weiling, Li, An, Ma, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707761/
https://www.ncbi.nlm.nih.gov/pubmed/33366377
http://dx.doi.org/10.1080/23802359.2019.1693287
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author Chen, Wenna
Liang, Weiling
Li, An
Ma, Jie
author_facet Chen, Wenna
Liang, Weiling
Li, An
Ma, Jie
author_sort Chen, Wenna
collection PubMed
description Rauvolfia verticillata is a medical plant (Apocynaceae) widely distributed from India to China, the Indo-China Peninsula, Indonesia, and the Philippines. The first complete plastid genome sequence of the species reported here was 155,856 bp in length, with the large single-copy (LSC) region of 86,085 bp, the small single-copy (SSC) region of 18,299 bp, and two inverted repeats (IRa and IRb) of 25,736 bp. The plastome contained 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content was 37.92%. The result from phylogenetic analysis suggests that Rauvolfia is closely related to the genus Catharanthus.
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spelling pubmed-77077612020-12-22 Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis Chen, Wenna Liang, Weiling Li, An Ma, Jie Mitochondrial DNA B Resour Mitogenome Announcement Rauvolfia verticillata is a medical plant (Apocynaceae) widely distributed from India to China, the Indo-China Peninsula, Indonesia, and the Philippines. The first complete plastid genome sequence of the species reported here was 155,856 bp in length, with the large single-copy (LSC) region of 86,085 bp, the small single-copy (SSC) region of 18,299 bp, and two inverted repeats (IRa and IRb) of 25,736 bp. The plastome contained 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content was 37.92%. The result from phylogenetic analysis suggests that Rauvolfia is closely related to the genus Catharanthus. Taylor & Francis 2019-11-21 /pmc/articles/PMC7707761/ /pubmed/33366377 http://dx.doi.org/10.1080/23802359.2019.1693287 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Chen, Wenna
Liang, Weiling
Li, An
Ma, Jie
Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title_full Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title_fullStr Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title_full_unstemmed Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title_short Characterization of the complete plastid genome of Rauvolfia verticillata (Apocynaceae), with its phylogenetic analysis
title_sort characterization of the complete plastid genome of rauvolfia verticillata (apocynaceae), with its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707761/
https://www.ncbi.nlm.nih.gov/pubmed/33366377
http://dx.doi.org/10.1080/23802359.2019.1693287
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AT lian characterizationofthecompleteplastidgenomeofrauvolfiaverticillataapocynaceaewithitsphylogeneticanalysis
AT majie characterizationofthecompleteplastidgenomeofrauvolfiaverticillataapocynaceaewithitsphylogeneticanalysis

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