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The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb
Triosteum himalayanum is a perennial herb which is distributed in the eastern Himalayas, Hengduan Mountains, and central China. The complete chloroplast genome of T. himalayanum is studied for the first time, which is 154,579 bp in length and is divided into four regions: two inverted repeat (IRA an...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707766/ https://www.ncbi.nlm.nih.gov/pubmed/33366379 http://dx.doi.org/10.1080/23802359.2019.1693289 |
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author | Liu, Hai Rui Fang, Jie Xia, Mingze Xiao, Qingmeng Zhang, Dejun Xie, Jing Chen, Shilong |
author_facet | Liu, Hai Rui Fang, Jie Xia, Mingze Xiao, Qingmeng Zhang, Dejun Xie, Jing Chen, Shilong |
author_sort | Liu, Hai Rui |
collection | PubMed |
description | Triosteum himalayanum is a perennial herb which is distributed in the eastern Himalayas, Hengduan Mountains, and central China. The complete chloroplast genome of T. himalayanum is studied for the first time, which is 154,579 bp in length and is divided into four regions: two inverted repeat (IRA and IRB) regions of 23,370 bp, a small single copy (SSC) region of 18,682 bp and a large single copy (LSC) region of 89,157 bp. The plastid genome contains 133 genes, including 86 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. The overall CG content in the chloroplast genome of T. himalayanum is 38.38%. The phylogenetic analysis on the complete plastome sequence of T. himalayanum will help to show the intergeneric diversity of Caprifoliaceae. |
format | Online Article Text |
id | pubmed-7707766 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77077662020-12-22 The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb Liu, Hai Rui Fang, Jie Xia, Mingze Xiao, Qingmeng Zhang, Dejun Xie, Jing Chen, Shilong Mitochondrial DNA B Resour Mitogenome Announcement Triosteum himalayanum is a perennial herb which is distributed in the eastern Himalayas, Hengduan Mountains, and central China. The complete chloroplast genome of T. himalayanum is studied for the first time, which is 154,579 bp in length and is divided into four regions: two inverted repeat (IRA and IRB) regions of 23,370 bp, a small single copy (SSC) region of 18,682 bp and a large single copy (LSC) region of 89,157 bp. The plastid genome contains 133 genes, including 86 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. The overall CG content in the chloroplast genome of T. himalayanum is 38.38%. The phylogenetic analysis on the complete plastome sequence of T. himalayanum will help to show the intergeneric diversity of Caprifoliaceae. Taylor & Francis 2019-11-21 /pmc/articles/PMC7707766/ /pubmed/33366379 http://dx.doi.org/10.1080/23802359.2019.1693289 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Liu, Hai Rui Fang, Jie Xia, Mingze Xiao, Qingmeng Zhang, Dejun Xie, Jing Chen, Shilong The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title | The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title_full | The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title_fullStr | The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title_full_unstemmed | The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title_short | The complete chloroplast genome of Triosteum himalayanum (Caprifoliaceae), a perennial alpine herb |
title_sort | complete chloroplast genome of triosteum himalayanum (caprifoliaceae), a perennial alpine herb |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707766/ https://www.ncbi.nlm.nih.gov/pubmed/33366379 http://dx.doi.org/10.1080/23802359.2019.1693289 |
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