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The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)

Blastus pauciflorus, a shrub endemic to Hong Kong and Guangdong, south China, growing on low-altitude hillsides, under the forest. The species is controversial in classification. Herein, we report the complete chloroplast genome sequence assembled from Illumina pair-end sequencing data, with aims to...

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Autores principales: Wen, Zhen Ying, Zeng, Si Jin, Han, Wenchao, Chen, Bin, Peng, Dong Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707767/
https://www.ncbi.nlm.nih.gov/pubmed/33366219
http://dx.doi.org/10.1080/23802359.2019.1687035
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author Wen, Zhen Ying
Zeng, Si Jin
Han, Wenchao
Chen, Bin
Peng, Dong Hui
author_facet Wen, Zhen Ying
Zeng, Si Jin
Han, Wenchao
Chen, Bin
Peng, Dong Hui
author_sort Wen, Zhen Ying
collection PubMed
description Blastus pauciflorus, a shrub endemic to Hong Kong and Guangdong, south China, growing on low-altitude hillsides, under the forest. The species is controversial in classification. Herein, we report the complete chloroplast genome sequence assembled from Illumina pair-end sequencing data, with aims to resolve its relationship with the related species. The complete chloroplast genome was 155,983 bp in length, includes two inverted repeat regions (IRs) of 26,716 bp each, which were separated by a large single copy region (LSC) 86,101 bp and a small single copy region (SSC) 16,450 bp. The chloroplast genome contained 129 genes, including 82 protein-coding genes, 2 pseudogenes, 37 tRNA genes and 8 rRNA genes. The overall GC content in the chloroplast genome of B. pauciflorus was 37.0%. Phylogenetic analysis showed that B. pauciflorus is closed to B. cochinchinensis.
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spelling pubmed-77077672020-12-22 The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae) Wen, Zhen Ying Zeng, Si Jin Han, Wenchao Chen, Bin Peng, Dong Hui Mitochondrial DNA B Resour Mitogenome Announcement Blastus pauciflorus, a shrub endemic to Hong Kong and Guangdong, south China, growing on low-altitude hillsides, under the forest. The species is controversial in classification. Herein, we report the complete chloroplast genome sequence assembled from Illumina pair-end sequencing data, with aims to resolve its relationship with the related species. The complete chloroplast genome was 155,983 bp in length, includes two inverted repeat regions (IRs) of 26,716 bp each, which were separated by a large single copy region (LSC) 86,101 bp and a small single copy region (SSC) 16,450 bp. The chloroplast genome contained 129 genes, including 82 protein-coding genes, 2 pseudogenes, 37 tRNA genes and 8 rRNA genes. The overall GC content in the chloroplast genome of B. pauciflorus was 37.0%. Phylogenetic analysis showed that B. pauciflorus is closed to B. cochinchinensis. Taylor & Francis 2019-11-06 /pmc/articles/PMC7707767/ /pubmed/33366219 http://dx.doi.org/10.1080/23802359.2019.1687035 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wen, Zhen Ying
Zeng, Si Jin
Han, Wenchao
Chen, Bin
Peng, Dong Hui
The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title_full The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title_fullStr The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title_full_unstemmed The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title_short The complete chloroplast genome sequence of Blastus pauciflorus (Melastomataceae)
title_sort complete chloroplast genome sequence of blastus pauciflorus (melastomataceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707767/
https://www.ncbi.nlm.nih.gov/pubmed/33366219
http://dx.doi.org/10.1080/23802359.2019.1687035
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