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The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)

The complete chloroplast genome sequence of Populus tremuloides was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremuloides was 155,816 bp in length, containing a large single-copy region (LSC) of 85,804 bp, a small single-copy region (SSC) of 16,489 bp, and two inv...

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Detalles Bibliográficos
Autores principales: Li, Ang, Hou, Zhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707770/
https://www.ncbi.nlm.nih.gov/pubmed/33366252
http://dx.doi.org/10.1080/23802359.2019.1688121
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author Li, Ang
Hou, Zhe
author_facet Li, Ang
Hou, Zhe
author_sort Li, Ang
collection PubMed
description The complete chloroplast genome sequence of Populus tremuloides was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremuloides was 155,816 bp in length, containing a large single-copy region (LSC) of 85,804 bp, a small single-copy region (SSC) of 16,489 bp, and two inverted repeat (IR) regions of 26,962 bp. The overall GC content is 36.71%, while the correponding values of the LSC, SSC, and IR regions are 64.9%, 69.2%, and 60.3%, respectively. The genome contains 167 complete genes, including 86 protein-coding genes (77 protein-coding gene species), 73 tRNA genes (29 tRNA species) and 8 rRNA genes(4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. tremuloides and Populus tremula clustered together as sisters to other Populus species.
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spelling pubmed-77077702020-12-22 The complete chloroplast genome sequence of Populus tremuloides (Salicaceae) Li, Ang Hou, Zhe Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Populus tremuloides was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremuloides was 155,816 bp in length, containing a large single-copy region (LSC) of 85,804 bp, a small single-copy region (SSC) of 16,489 bp, and two inverted repeat (IR) regions of 26,962 bp. The overall GC content is 36.71%, while the correponding values of the LSC, SSC, and IR regions are 64.9%, 69.2%, and 60.3%, respectively. The genome contains 167 complete genes, including 86 protein-coding genes (77 protein-coding gene species), 73 tRNA genes (29 tRNA species) and 8 rRNA genes(4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. tremuloides and Populus tremula clustered together as sisters to other Populus species. Taylor & Francis 2019-11-08 /pmc/articles/PMC7707770/ /pubmed/33366252 http://dx.doi.org/10.1080/23802359.2019.1688121 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Ang
Hou, Zhe
The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title_full The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title_fullStr The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title_short The complete chloroplast genome sequence of Populus tremuloides (Salicaceae)
title_sort complete chloroplast genome sequence of populus tremuloides (salicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707770/
https://www.ncbi.nlm.nih.gov/pubmed/33366252
http://dx.doi.org/10.1080/23802359.2019.1688121
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