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The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)

This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadr...

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Autores principales: Wu, Mingsong, Qin, Ming, Qian, Xin, Zhang, Kai, Tu, Tieyao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707775/
https://www.ncbi.nlm.nih.gov/pubmed/33366385
http://dx.doi.org/10.1080/23802359.2019.1693299
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author Wu, Mingsong
Qin, Ming
Qian, Xin
Zhang, Kai
Tu, Tieyao
author_facet Wu, Mingsong
Qin, Ming
Qian, Xin
Zhang, Kai
Tu, Tieyao
author_sort Wu, Mingsong
collection PubMed
description This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadripartite structure consisting of two inverted repeats (IR = 24,286 bp), one small single copy (SSC = 18,334 bp), and one large single copy (LSC = 82,715 bp). We found 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on the newly sequenced plastid genome of Ph. pulchellum and 11 plastomes obtained from GenBank recovered a strongly supported phylogenetic backbone of the tribe Desmodieae and a sister-relationship between Phyllodium and Ohwia.
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spelling pubmed-77077752020-12-22 The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) Wu, Mingsong Qin, Ming Qian, Xin Zhang, Kai Tu, Tieyao Mitochondrial DNA B Resour Mitogenome Announcement This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadripartite structure consisting of two inverted repeats (IR = 24,286 bp), one small single copy (SSC = 18,334 bp), and one large single copy (LSC = 82,715 bp). We found 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on the newly sequenced plastid genome of Ph. pulchellum and 11 plastomes obtained from GenBank recovered a strongly supported phylogenetic backbone of the tribe Desmodieae and a sister-relationship between Phyllodium and Ohwia. Taylor & Francis 2019-11-22 /pmc/articles/PMC7707775/ /pubmed/33366385 http://dx.doi.org/10.1080/23802359.2019.1693299 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Mingsong
Qin, Ming
Qian, Xin
Zhang, Kai
Tu, Tieyao
The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title_full The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title_fullStr The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title_full_unstemmed The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title_short The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
title_sort complete plastid genome sequence of phyllodium pulchellum (l.) desv. (leguminosae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707775/
https://www.ncbi.nlm.nih.gov/pubmed/33366385
http://dx.doi.org/10.1080/23802359.2019.1693299
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