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The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae)
This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707775/ https://www.ncbi.nlm.nih.gov/pubmed/33366385 http://dx.doi.org/10.1080/23802359.2019.1693299 |
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author | Wu, Mingsong Qin, Ming Qian, Xin Zhang, Kai Tu, Tieyao |
author_facet | Wu, Mingsong Qin, Ming Qian, Xin Zhang, Kai Tu, Tieyao |
author_sort | Wu, Mingsong |
collection | PubMed |
description | This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadripartite structure consisting of two inverted repeats (IR = 24,286 bp), one small single copy (SSC = 18,334 bp), and one large single copy (LSC = 82,715 bp). We found 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on the newly sequenced plastid genome of Ph. pulchellum and 11 plastomes obtained from GenBank recovered a strongly supported phylogenetic backbone of the tribe Desmodieae and a sister-relationship between Phyllodium and Ohwia. |
format | Online Article Text |
id | pubmed-7707775 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77077752020-12-22 The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) Wu, Mingsong Qin, Ming Qian, Xin Zhang, Kai Tu, Tieyao Mitochondrial DNA B Resour Mitogenome Announcement This study investigated the complete plastid genome of Phyllodium pulchellum, which represents the first report of the complete plastome for the genus Phyllodium in the tribe Desmodieae of the subfamily Papilionoideae. De novo assembly and annotation showed that the plastid genome is a typical quadripartite structure consisting of two inverted repeats (IR = 24,286 bp), one small single copy (SSC = 18,334 bp), and one large single copy (LSC = 82,715 bp). We found 111 unique genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on the newly sequenced plastid genome of Ph. pulchellum and 11 plastomes obtained from GenBank recovered a strongly supported phylogenetic backbone of the tribe Desmodieae and a sister-relationship between Phyllodium and Ohwia. Taylor & Francis 2019-11-22 /pmc/articles/PMC7707775/ /pubmed/33366385 http://dx.doi.org/10.1080/23802359.2019.1693299 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wu, Mingsong Qin, Ming Qian, Xin Zhang, Kai Tu, Tieyao The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title | The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title_full | The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title_fullStr | The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title_full_unstemmed | The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title_short | The complete plastid genome sequence of Phyllodium pulchellum (L.) Desv. (Leguminosae) |
title_sort | complete plastid genome sequence of phyllodium pulchellum (l.) desv. (leguminosae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707775/ https://www.ncbi.nlm.nih.gov/pubmed/33366385 http://dx.doi.org/10.1080/23802359.2019.1693299 |
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