The complete chloroplast genome of Actinidia macrosperma

Actinidia macrosperma (A. macrosperma) is a medicinal plant in China, which has been well known for its activities against leprosy and cancers. In this study, we assembled and characterized the complete chloroplast (cp) genome sequence of A. macrosperma in an effort to provide genomic resources for...

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Autores principales: Chen, Yi, Xu, Yiqing, Zhang, Kai, Song, Yanlin, He, Qiuyu, Qian, Qiuyu, Xu, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707781/
https://www.ncbi.nlm.nih.gov/pubmed/33366376
http://dx.doi.org/10.1080/23802359.2019.1692733
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author Chen, Yi
Xu, Yiqing
Zhang, Kai
Song, Yanlin
He, Qiuyu
Qian, Qiuyu
Xu, Jian
author_facet Chen, Yi
Xu, Yiqing
Zhang, Kai
Song, Yanlin
He, Qiuyu
Qian, Qiuyu
Xu, Jian
author_sort Chen, Yi
collection PubMed
description Actinidia macrosperma (A. macrosperma) is a medicinal plant in China, which has been well known for its activities against leprosy and cancers. In this study, we assembled and characterized the complete chloroplast (cp) genome sequence of A. macrosperma in an effort to provide genomic resources for promoting its conservation. The cp genome is 156,231 bp in length, containing a pair of 23,720 bp inverted repeat (IR) regions, which is separated by a large single copy region (LSC) of 88,214 bp and a small single copy region (SSC) of 20,577 bp. A total of 132 genes were annotated in this cp genome, including 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis highly supported that A. macrosperma was evolutionarily close to another Actinidia species Actinidia deliciosa.
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spelling pubmed-77077812020-12-22 The complete chloroplast genome of Actinidia macrosperma Chen, Yi Xu, Yiqing Zhang, Kai Song, Yanlin He, Qiuyu Qian, Qiuyu Xu, Jian Mitochondrial DNA B Resour Mitogenome Announcement Actinidia macrosperma (A. macrosperma) is a medicinal plant in China, which has been well known for its activities against leprosy and cancers. In this study, we assembled and characterized the complete chloroplast (cp) genome sequence of A. macrosperma in an effort to provide genomic resources for promoting its conservation. The cp genome is 156,231 bp in length, containing a pair of 23,720 bp inverted repeat (IR) regions, which is separated by a large single copy region (LSC) of 88,214 bp and a small single copy region (SSC) of 20,577 bp. A total of 132 genes were annotated in this cp genome, including 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis highly supported that A. macrosperma was evolutionarily close to another Actinidia species Actinidia deliciosa. Taylor & Francis 2019-11-21 /pmc/articles/PMC7707781/ /pubmed/33366376 http://dx.doi.org/10.1080/23802359.2019.1692733 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Chen, Yi
Xu, Yiqing
Zhang, Kai
Song, Yanlin
He, Qiuyu
Qian, Qiuyu
Xu, Jian
The complete chloroplast genome of Actinidia macrosperma
title The complete chloroplast genome of Actinidia macrosperma
title_full The complete chloroplast genome of Actinidia macrosperma
title_fullStr The complete chloroplast genome of Actinidia macrosperma
title_full_unstemmed The complete chloroplast genome of Actinidia macrosperma
title_short The complete chloroplast genome of Actinidia macrosperma
title_sort complete chloroplast genome of actinidia macrosperma
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707781/
https://www.ncbi.nlm.nih.gov/pubmed/33366376
http://dx.doi.org/10.1080/23802359.2019.1692733
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