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Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb

Gynostemma pentaphyllum (Cucurbitaceae) is a perennial medicinal herb widely distributed in China. It’s well known for its medicinal values due to contains important medicinal components gypenosides. Here, we first report and characterize its complete chloroplast genome based on Illumina paired-end...

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Detalles Bibliográficos
Autores principales: Shi, Yancai, Zou, Rong, Liu, Bingbing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707782/
https://www.ncbi.nlm.nih.gov/pubmed/33366273
http://dx.doi.org/10.1080/23802359.2019.1688726
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author Shi, Yancai
Zou, Rong
Liu, Bingbing
author_facet Shi, Yancai
Zou, Rong
Liu, Bingbing
author_sort Shi, Yancai
collection PubMed
description Gynostemma pentaphyllum (Cucurbitaceae) is a perennial medicinal herb widely distributed in China. It’s well known for its medicinal values due to contains important medicinal components gypenosides. Here, we first report and characterize its complete chloroplast genome based on Illumina paired-end sequencing data. The complete plastid genome was 154,457 bp, which contained inverted repeats (IR) of 25,603 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 84,998 bp and 18,253 bp, respectively. The cpDNA contains 132 genes, comprising 81 protein-coding genes, 37 tRNA genes, 8 rRNA genes and six processed pseudogenes. The overall GC content of the plastome is 37.1%. The phylogenetic analysis of 17 selected chloroplast genomes demonstrated that G. pentaphyllum is closely related to the congeneric G. compressum.
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spelling pubmed-77077822020-12-22 Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb Shi, Yancai Zou, Rong Liu, Bingbing Mitochondrial DNA B Resour Mitogenome Announcements Gynostemma pentaphyllum (Cucurbitaceae) is a perennial medicinal herb widely distributed in China. It’s well known for its medicinal values due to contains important medicinal components gypenosides. Here, we first report and characterize its complete chloroplast genome based on Illumina paired-end sequencing data. The complete plastid genome was 154,457 bp, which contained inverted repeats (IR) of 25,603 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 84,998 bp and 18,253 bp, respectively. The cpDNA contains 132 genes, comprising 81 protein-coding genes, 37 tRNA genes, 8 rRNA genes and six processed pseudogenes. The overall GC content of the plastome is 37.1%. The phylogenetic analysis of 17 selected chloroplast genomes demonstrated that G. pentaphyllum is closely related to the congeneric G. compressum. Taylor & Francis 2019-11-12 /pmc/articles/PMC7707782/ /pubmed/33366273 http://dx.doi.org/10.1080/23802359.2019.1688726 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcements
Shi, Yancai
Zou, Rong
Liu, Bingbing
Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title_full Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title_fullStr Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title_full_unstemmed Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title_short Complete chloroplast genome sequence of Gynostemma pentaphyllum (Cucurbitaceae), a perennial medicinal herb
title_sort complete chloroplast genome sequence of gynostemma pentaphyllum (cucurbitaceae), a perennial medicinal herb
topic Mitogenome Announcements
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707782/
https://www.ncbi.nlm.nih.gov/pubmed/33366273
http://dx.doi.org/10.1080/23802359.2019.1688726
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