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Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea
The first complete chloroplast genome sequence of Korean insular endemic to Ulleung-do Island, Zabelia insularis, was reported in this study. The plastome size was 158,100 bp in total length, with one large single copy (90,529 bp), one small single copy (17,235 bp), and two inverted repeat (IR) regi...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707792/ https://www.ncbi.nlm.nih.gov/pubmed/33366353 http://dx.doi.org/10.1080/23802359.2019.1692730 |
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author | Lee, Woong Yang, Ji Young Kim, Seung-Chul Pak, Jae-Hong |
author_facet | Lee, Woong Yang, Ji Young Kim, Seung-Chul Pak, Jae-Hong |
author_sort | Lee, Woong |
collection | PubMed |
description | The first complete chloroplast genome sequence of Korean insular endemic to Ulleung-do Island, Zabelia insularis, was reported in this study. The plastome size was 158,100 bp in total length, with one large single copy (90,529 bp), one small single copy (17,235 bp), and two inverted repeat (IR) regions (IR(a) and IR(b), each with 25,168 bp). The overall GC content was 38.3% and the genome contained 130 genes, including 83 protein-coding, 37 transfer RNA, and 8 ribosomal RNA genes. Phylogenetic analysis of 15 representative plastomes within the Caprifoliaceae suggests that Z. insularis is closely related to the species in the genus Patrinia. |
format | Online Article Text |
id | pubmed-7707792 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77077922020-12-22 Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea Lee, Woong Yang, Ji Young Kim, Seung-Chul Pak, Jae-Hong Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequence of Korean insular endemic to Ulleung-do Island, Zabelia insularis, was reported in this study. The plastome size was 158,100 bp in total length, with one large single copy (90,529 bp), one small single copy (17,235 bp), and two inverted repeat (IR) regions (IR(a) and IR(b), each with 25,168 bp). The overall GC content was 38.3% and the genome contained 130 genes, including 83 protein-coding, 37 transfer RNA, and 8 ribosomal RNA genes. Phylogenetic analysis of 15 representative plastomes within the Caprifoliaceae suggests that Z. insularis is closely related to the species in the genus Patrinia. Taylor & Francis 2019-11-20 /pmc/articles/PMC7707792/ /pubmed/33366353 http://dx.doi.org/10.1080/23802359.2019.1692730 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Lee, Woong Yang, Ji Young Kim, Seung-Chul Pak, Jae-Hong Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title | Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title_full | Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title_fullStr | Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title_full_unstemmed | Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title_short | Characterization of the complete chloroplast genome of Ulleung-do Island endemic, Zabelia insularis (Caprifoliaceae), in Korea |
title_sort | characterization of the complete chloroplast genome of ulleung-do island endemic, zabelia insularis (caprifoliaceae), in korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707792/ https://www.ncbi.nlm.nih.gov/pubmed/33366353 http://dx.doi.org/10.1080/23802359.2019.1692730 |
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