Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China

Hemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H....

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Detalles Bibliográficos
Autores principales: Li, Yanrong, Li, Jinghui, Fang, Lingli, Jiang, Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707793/
https://www.ncbi.nlm.nih.gov/pubmed/33366336
http://dx.doi.org/10.1080/23802359.2019.1692726
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author Li, Yanrong
Li, Jinghui
Fang, Lingli
Jiang, Ming
author_facet Li, Yanrong
Li, Jinghui
Fang, Lingli
Jiang, Ming
author_sort Li, Yanrong
collection PubMed
description Hemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H. zhejiangensis is 157,289 bp in size, with a GC content of 37.1%. Sequencing analyses reveal that the CP genome encodes 133 genes, including 84 protein-coding genes, 8 rRNA genes, 37 tRNA genes, and four pseudogenes. Phylogenetic analysis results indicate that H. zhejiangensis is clustered with H. lijiangensis, with a support value of 100%, and they are sister to the three Gynostemma species.
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spelling pubmed-77077932020-12-22 Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China Li, Yanrong Li, Jinghui Fang, Lingli Jiang, Ming Mitochondrial DNA B Resour Mitogenome Announcement Hemsleya zhejiangensis is a rare and endangered plant species which is listed as a key protected wild plant in Zhejiang province, China. In our present study, we assembled the complete chloroplast (CP) genome of H. zhejiangensis using high-throughput sequencing data. The whole genome sequence of H. zhejiangensis is 157,289 bp in size, with a GC content of 37.1%. Sequencing analyses reveal that the CP genome encodes 133 genes, including 84 protein-coding genes, 8 rRNA genes, 37 tRNA genes, and four pseudogenes. Phylogenetic analysis results indicate that H. zhejiangensis is clustered with H. lijiangensis, with a support value of 100%, and they are sister to the three Gynostemma species. Taylor & Francis 2019-11-18 /pmc/articles/PMC7707793/ /pubmed/33366336 http://dx.doi.org/10.1080/23802359.2019.1692726 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Yanrong
Li, Jinghui
Fang, Lingli
Jiang, Ming
Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title_full Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title_fullStr Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title_short Characterization of the complete chloroplast genome sequence of Hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in Zhejiang province, China
title_sort characterization of the complete chloroplast genome sequence of hemsleya zhejiangensis (cucurbitaceae), a rare and endangered wild plant species in zhejiang province, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707793/
https://www.ncbi.nlm.nih.gov/pubmed/33366336
http://dx.doi.org/10.1080/23802359.2019.1692726
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