The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome

The first complete chloroplast genome (cpDNA) sequence of Pittosporum kerrii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 153,581 bp in length, contains a large single-copy region (LSC) of 84,940 bp and a small single-copy region (SSC) of 18,741 bp, which w...

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Detalles Bibliográficos
Autores principales: Wang, Yi, Zhao, Chuan, Li, Yunqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707811/
https://www.ncbi.nlm.nih.gov/pubmed/33366269
http://dx.doi.org/10.1080/23802359.2019.1688712
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author Wang, Yi
Zhao, Chuan
Li, Yunqing
author_facet Wang, Yi
Zhao, Chuan
Li, Yunqing
author_sort Wang, Yi
collection PubMed
description The first complete chloroplast genome (cpDNA) sequence of Pittosporum kerrii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 153,581 bp in length, contains a large single-copy region (LSC) of 84,940 bp and a small single-copy region (SSC) of 18,741 bp, which were separated by a pair of inverted repeats (IR) regions of 24,950 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.3%, and the corresponding values of the LSC, SSC, and IR regions are 36.5, 32.5, and 43.3%, respectively. Further, phylogenomic analysis showed that P. kerrii clustered in a unique clade in order Apiales.
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spelling pubmed-77078112020-12-22 The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome Wang, Yi Zhao, Chuan Li, Yunqing Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Pittosporum kerrii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 153,581 bp in length, contains a large single-copy region (LSC) of 84,940 bp and a small single-copy region (SSC) of 18,741 bp, which were separated by a pair of inverted repeats (IR) regions of 24,950 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.3%, and the corresponding values of the LSC, SSC, and IR regions are 36.5, 32.5, and 43.3%, respectively. Further, phylogenomic analysis showed that P. kerrii clustered in a unique clade in order Apiales. Taylor & Francis 2019-11-12 /pmc/articles/PMC7707811/ /pubmed/33366269 http://dx.doi.org/10.1080/23802359.2019.1688712 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wang, Yi
Zhao, Chuan
Li, Yunqing
The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title_full The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title_fullStr The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title_full_unstemmed The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title_short The complete chloroplast genome sequence of Pittosporum kerrii: the first Pittosporaceae plastome
title_sort complete chloroplast genome sequence of pittosporum kerrii: the first pittosporaceae plastome
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707811/
https://www.ncbi.nlm.nih.gov/pubmed/33366269
http://dx.doi.org/10.1080/23802359.2019.1688712
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