Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)

Dendrocalamopsis vario-striata is one of the most economical and ornamental significant bamboo. It has the characteristics of annual flowering but no death. Here, we report on the first complete chloroplast (cp) genome of D. vario-striata. Its full-length of 139,458 bp, include large single-copy (LS...

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Autores principales: Lin, Ru-Qiang, Jiang, Yu-Ting, Zeng, Qin-Meng, Liu, Bin, Liu, Zhong-Jian, Chen, Shi-Pin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707846/
https://www.ncbi.nlm.nih.gov/pubmed/33365769
http://dx.doi.org/10.1080/23802359.2019.1660264
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author Lin, Ru-Qiang
Jiang, Yu-Ting
Zeng, Qin-Meng
Liu, Bin
Liu, Zhong-Jian
Chen, Shi-Pin
author_facet Lin, Ru-Qiang
Jiang, Yu-Ting
Zeng, Qin-Meng
Liu, Bin
Liu, Zhong-Jian
Chen, Shi-Pin
author_sort Lin, Ru-Qiang
collection PubMed
description Dendrocalamopsis vario-striata is one of the most economical and ornamental significant bamboo. It has the characteristics of annual flowering but no death. Here, we report on the first complete chloroplast (cp) genome of D. vario-striata. Its full-length of 139,458 bp, include large single-copy (LSC) region of 83,279 bp, small single-copy (SSC) region of 12,143bp, a pair of invert repeats (IR) regions of 22,018bp. Plastid genome contains 264 genes, 170 protein-coding genes, 78 tRNA genes, and 16 rRNA genes. The maximum likelihood phylogenetic analysis shows that D. vario-striata was sister to all other species of Bambusoideae.
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spelling pubmed-77078462020-12-22 Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae) Lin, Ru-Qiang Jiang, Yu-Ting Zeng, Qin-Meng Liu, Bin Liu, Zhong-Jian Chen, Shi-Pin Mitochondrial DNA B Resour Mitogenome Announcement Dendrocalamopsis vario-striata is one of the most economical and ornamental significant bamboo. It has the characteristics of annual flowering but no death. Here, we report on the first complete chloroplast (cp) genome of D. vario-striata. Its full-length of 139,458 bp, include large single-copy (LSC) region of 83,279 bp, small single-copy (SSC) region of 12,143bp, a pair of invert repeats (IR) regions of 22,018bp. Plastid genome contains 264 genes, 170 protein-coding genes, 78 tRNA genes, and 16 rRNA genes. The maximum likelihood phylogenetic analysis shows that D. vario-striata was sister to all other species of Bambusoideae. Taylor & Francis 2019-09-06 /pmc/articles/PMC7707846/ /pubmed/33365769 http://dx.doi.org/10.1080/23802359.2019.1660264 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lin, Ru-Qiang
Jiang, Yu-Ting
Zeng, Qin-Meng
Liu, Bin
Liu, Zhong-Jian
Chen, Shi-Pin
Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title_full Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title_fullStr Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title_full_unstemmed Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title_short Complete chloroplast genome sequence of bamboo Dendrocalamopsis vario-striata (Gramineae Bambusoideae)
title_sort complete chloroplast genome sequence of bamboo dendrocalamopsis vario-striata (gramineae bambusoideae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7707846/
https://www.ncbi.nlm.nih.gov/pubmed/33365769
http://dx.doi.org/10.1080/23802359.2019.1660264
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