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HuskinDB, a database for skin permeation of xenobiotics
Skin permeation is an essential biological property of small organic compounds our body is exposed to, such as drugs in topic formulations, cosmetics, and environmental toxins. Despite the limited availability of experimental data, there is a lack of systematic analysis and structure. We present a n...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7708619/ https://www.ncbi.nlm.nih.gov/pubmed/33262341 http://dx.doi.org/10.1038/s41597-020-00764-z |
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author | Stepanov, Dmitri Canipa, Steven Wolber, Gerhard |
author_facet | Stepanov, Dmitri Canipa, Steven Wolber, Gerhard |
author_sort | Stepanov, Dmitri |
collection | PubMed |
description | Skin permeation is an essential biological property of small organic compounds our body is exposed to, such as drugs in topic formulations, cosmetics, and environmental toxins. Despite the limited availability of experimental data, there is a lack of systematic analysis and structure. We present a novel resource on skin permeation data that collects all measurements available in the literature and systematically structures experimental conditions. Besides the skin permeation value k(p), it includes experimental protocols such as skin source site, skin layer used, preparation technique, storage conditions, as well as test conditions such as temperature, pH as well as the type of donor and acceptor solution. It is important to include these parameters in the assessment of the skin permeation data. In addition, we provide an analysis of physicochemical properties and chemical space coverage, laying the basis for applicability domain determination of insights drawn from the collected data points. The database is freely accessible under https://huskindb.drug-design.de or 10.7303/syn21998881. |
format | Online Article Text |
id | pubmed-7708619 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-77086192020-12-03 HuskinDB, a database for skin permeation of xenobiotics Stepanov, Dmitri Canipa, Steven Wolber, Gerhard Sci Data Data Descriptor Skin permeation is an essential biological property of small organic compounds our body is exposed to, such as drugs in topic formulations, cosmetics, and environmental toxins. Despite the limited availability of experimental data, there is a lack of systematic analysis and structure. We present a novel resource on skin permeation data that collects all measurements available in the literature and systematically structures experimental conditions. Besides the skin permeation value k(p), it includes experimental protocols such as skin source site, skin layer used, preparation technique, storage conditions, as well as test conditions such as temperature, pH as well as the type of donor and acceptor solution. It is important to include these parameters in the assessment of the skin permeation data. In addition, we provide an analysis of physicochemical properties and chemical space coverage, laying the basis for applicability domain determination of insights drawn from the collected data points. The database is freely accessible under https://huskindb.drug-design.de or 10.7303/syn21998881. Nature Publishing Group UK 2020-12-01 /pmc/articles/PMC7708619/ /pubmed/33262341 http://dx.doi.org/10.1038/s41597-020-00764-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Stepanov, Dmitri Canipa, Steven Wolber, Gerhard HuskinDB, a database for skin permeation of xenobiotics |
title | HuskinDB, a database for skin permeation of xenobiotics |
title_full | HuskinDB, a database for skin permeation of xenobiotics |
title_fullStr | HuskinDB, a database for skin permeation of xenobiotics |
title_full_unstemmed | HuskinDB, a database for skin permeation of xenobiotics |
title_short | HuskinDB, a database for skin permeation of xenobiotics |
title_sort | huskindb, a database for skin permeation of xenobiotics |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7708619/ https://www.ncbi.nlm.nih.gov/pubmed/33262341 http://dx.doi.org/10.1038/s41597-020-00764-z |
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