The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China

Aralia atropurpurea (Araliaceae) is a perennial medicinal herb endemic to southwest China. In this study, the complete chloroplast (cp) genome of A. atropurpurea was reported and phylogenetic analysis was conducted. The cp genome of A. atropurpurea is 156,272 bp in length, consisting two inverted re...

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Detalles Bibliográficos
Autores principales: Liu, Jing, Wen, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710312/
https://www.ncbi.nlm.nih.gov/pubmed/33365722
http://dx.doi.org/10.1080/23802359.2019.1643805
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author Liu, Jing
Wen, Jun
author_facet Liu, Jing
Wen, Jun
author_sort Liu, Jing
collection PubMed
description Aralia atropurpurea (Araliaceae) is a perennial medicinal herb endemic to southwest China. In this study, the complete chloroplast (cp) genome of A. atropurpurea was reported and phylogenetic analysis was conducted. The cp genome of A. atropurpurea is 156,272 bp in length, consisting two inverted repeats (IRs, 25,963 bp), a small single copy (SSC, 18,080 bp), and a large single copy (LSC, 86,266 bp) region. It encodes 133 genes including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum-likelihood tree shows A. atropurpurea grouping with the other two Aralia sect. Aralia species, and a close relationship between Aralia and Panax.
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spelling pubmed-77103122020-12-22 The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China Liu, Jing Wen, Jun Mitochondrial DNA B Resour Mitogenome Announcement Aralia atropurpurea (Araliaceae) is a perennial medicinal herb endemic to southwest China. In this study, the complete chloroplast (cp) genome of A. atropurpurea was reported and phylogenetic analysis was conducted. The cp genome of A. atropurpurea is 156,272 bp in length, consisting two inverted repeats (IRs, 25,963 bp), a small single copy (SSC, 18,080 bp), and a large single copy (LSC, 86,266 bp) region. It encodes 133 genes including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The maximum-likelihood tree shows A. atropurpurea grouping with the other two Aralia sect. Aralia species, and a close relationship between Aralia and Panax. Taylor & Francis 2019-07-30 /pmc/articles/PMC7710312/ /pubmed/33365722 http://dx.doi.org/10.1080/23802359.2019.1643805 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Jing
Wen, Jun
The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title_full The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title_fullStr The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title_full_unstemmed The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title_short The complete chloroplast genome of Aralia atropurpurea (Araliaceae, the ginseng family) from the Sino-Himalayan region, China
title_sort complete chloroplast genome of aralia atropurpurea (araliaceae, the ginseng family) from the sino-himalayan region, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710312/
https://www.ncbi.nlm.nih.gov/pubmed/33365722
http://dx.doi.org/10.1080/23802359.2019.1643805
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