Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution

Ophrys aveyronensis is an orchid with disjunct geographic distribution. For biogeographic and conservation purpose, we sequenced its complete plastome using Illumina data. The complete plastome is 146,816 bp in length, consisting of a pair of inverted repeats (IRs) of 25,006 bp, a large single-copy...

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Autores principales: Bertrand, Joris A. M., Gibert, Anaïs, Llauro, Christel, Panaud, Olivier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710315/
https://www.ncbi.nlm.nih.gov/pubmed/33365944
http://dx.doi.org/10.1080/23802359.2019.1670748
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author Bertrand, Joris A. M.
Gibert, Anaïs
Llauro, Christel
Panaud, Olivier
author_facet Bertrand, Joris A. M.
Gibert, Anaïs
Llauro, Christel
Panaud, Olivier
author_sort Bertrand, Joris A. M.
collection PubMed
description Ophrys aveyronensis is an orchid with disjunct geographic distribution. For biogeographic and conservation purpose, we sequenced its complete plastome using Illumina data. The complete plastome is 146,816 bp in length, consisting of a pair of inverted repeats (IRs) of 25,006 bp, a large single-copy (LSC) region and a small single-copy region (SSC) of 80,495 and 16,309 bp, respectively. It was found to contain 133 genes, including 86 protein-coding genes, up to 39 trRNA genes and 8 rRNA genes. The overall GC content of the plastid genome is 36.9%. Phylogenetic inference confirms that O. aveyronensis is very close to O. sphegodes.
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spelling pubmed-77103152020-12-22 Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution Bertrand, Joris A. M. Gibert, Anaïs Llauro, Christel Panaud, Olivier Mitochondrial DNA B Resour Mitogenome Announcement Ophrys aveyronensis is an orchid with disjunct geographic distribution. For biogeographic and conservation purpose, we sequenced its complete plastome using Illumina data. The complete plastome is 146,816 bp in length, consisting of a pair of inverted repeats (IRs) of 25,006 bp, a large single-copy (LSC) region and a small single-copy region (SSC) of 80,495 and 16,309 bp, respectively. It was found to contain 133 genes, including 86 protein-coding genes, up to 39 trRNA genes and 8 rRNA genes. The overall GC content of the plastid genome is 36.9%. Phylogenetic inference confirms that O. aveyronensis is very close to O. sphegodes. Taylor & Francis 2019-09-26 /pmc/articles/PMC7710315/ /pubmed/33365944 http://dx.doi.org/10.1080/23802359.2019.1670748 Text en © 2019 University of Perpignan Via Domitia. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Bertrand, Joris A. M.
Gibert, Anaïs
Llauro, Christel
Panaud, Olivier
Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title_full Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title_fullStr Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title_full_unstemmed Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title_short Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution
title_sort characterization of the complete plastome of ophrys aveyronensis, a euro-mediterranean orchid with an intriguing disjunct geographic distribution
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710315/
https://www.ncbi.nlm.nih.gov/pubmed/33365944
http://dx.doi.org/10.1080/23802359.2019.1670748
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