Cargando…

Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)

We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Jiajia, Cao, Jinjun, Li, Weihai, Wang, Ying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710318/
https://www.ncbi.nlm.nih.gov/pubmed/33366019
http://dx.doi.org/10.1080/23802359.2019.1674722
_version_ 1783617923295739904
author Chen, Jiajia
Cao, Jinjun
Li, Weihai
Wang, Ying
author_facet Chen, Jiajia
Cao, Jinjun
Li, Weihai
Wang, Ying
author_sort Chen, Jiajia
collection PubMed
description We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37 genes and a control region like other stonefly. The A + T content of the whole mitogenome was 67.1%. All PCGs were 11,217 bp in length, accounting for 65.3% of the content of A + T. The A + T content of lrRNA and srRNA were 72.3% and 66.4%. The highest A + T content was in the control region (76.2%). There are 15 gene overlaps and 9 gene intergenic spacers in this mitochondrial genome. In addition, we performed phylogenetic analysis by using the Bayesian (BI) and Maximum Likelihood (ML) methods based on the concatenated data set of PCGs from 11 species in Pelidae and two species in Styloperlidae (outgroups). The clade K. chungnanshana + K. wangi was a sister group to K. klapaleki, which is consistent with the traditional morphological classification.
format Online
Article
Text
id pubmed-7710318
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77103182020-12-22 Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) Chen, Jiajia Cao, Jinjun Li, Weihai Wang, Ying Mitochondrial DNA B Resour Mitogenome Announcement We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37 genes and a control region like other stonefly. The A + T content of the whole mitogenome was 67.1%. All PCGs were 11,217 bp in length, accounting for 65.3% of the content of A + T. The A + T content of lrRNA and srRNA were 72.3% and 66.4%. The highest A + T content was in the control region (76.2%). There are 15 gene overlaps and 9 gene intergenic spacers in this mitochondrial genome. In addition, we performed phylogenetic analysis by using the Bayesian (BI) and Maximum Likelihood (ML) methods based on the concatenated data set of PCGs from 11 species in Pelidae and two species in Styloperlidae (outgroups). The clade K. chungnanshana + K. wangi was a sister group to K. klapaleki, which is consistent with the traditional morphological classification. Taylor & Francis 2019-10-09 /pmc/articles/PMC7710318/ /pubmed/33366019 http://dx.doi.org/10.1080/23802359.2019.1674722 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. to update the CATS schedule accordingly.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Chen, Jiajia
Cao, Jinjun
Li, Weihai
Wang, Ying
Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title_full Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title_fullStr Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title_full_unstemmed Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title_short Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
title_sort characterization of the complete mitochondrial genome of a stonefly species, kamimuria klapaleki (plecoptera: pelidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710318/
https://www.ncbi.nlm.nih.gov/pubmed/33366019
http://dx.doi.org/10.1080/23802359.2019.1674722
work_keys_str_mv AT chenjiajia characterizationofthecompletemitochondrialgenomeofastoneflyspecieskamimuriaklapalekiplecopterapelidae
AT caojinjun characterizationofthecompletemitochondrialgenomeofastoneflyspecieskamimuriaklapalekiplecopterapelidae
AT liweihai characterizationofthecompletemitochondrialgenomeofastoneflyspecieskamimuriaklapalekiplecopterapelidae
AT wangying characterizationofthecompletemitochondrialgenomeofastoneflyspecieskamimuriaklapalekiplecopterapelidae