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Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae)
We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710318/ https://www.ncbi.nlm.nih.gov/pubmed/33366019 http://dx.doi.org/10.1080/23802359.2019.1674722 |
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author | Chen, Jiajia Cao, Jinjun Li, Weihai Wang, Ying |
author_facet | Chen, Jiajia Cao, Jinjun Li, Weihai Wang, Ying |
author_sort | Chen, Jiajia |
collection | PubMed |
description | We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37 genes and a control region like other stonefly. The A + T content of the whole mitogenome was 67.1%. All PCGs were 11,217 bp in length, accounting for 65.3% of the content of A + T. The A + T content of lrRNA and srRNA were 72.3% and 66.4%. The highest A + T content was in the control region (76.2%). There are 15 gene overlaps and 9 gene intergenic spacers in this mitochondrial genome. In addition, we performed phylogenetic analysis by using the Bayesian (BI) and Maximum Likelihood (ML) methods based on the concatenated data set of PCGs from 11 species in Pelidae and two species in Styloperlidae (outgroups). The clade K. chungnanshana + K. wangi was a sister group to K. klapaleki, which is consistent with the traditional morphological classification. |
format | Online Article Text |
id | pubmed-7710318 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77103182020-12-22 Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) Chen, Jiajia Cao, Jinjun Li, Weihai Wang, Ying Mitochondrial DNA B Resour Mitogenome Announcement We have sequenced and analyzed complete mitochondrial genome (mitogenomes) of the Kamimuria klapaleki, the third mitochondrial genome in the genus Kamimuria, which belongs to the family Pelidae in this paper. The mitogenome of K. klapaleki is circular with the length of 16,077 bp, which possessed 37 genes and a control region like other stonefly. The A + T content of the whole mitogenome was 67.1%. All PCGs were 11,217 bp in length, accounting for 65.3% of the content of A + T. The A + T content of lrRNA and srRNA were 72.3% and 66.4%. The highest A + T content was in the control region (76.2%). There are 15 gene overlaps and 9 gene intergenic spacers in this mitochondrial genome. In addition, we performed phylogenetic analysis by using the Bayesian (BI) and Maximum Likelihood (ML) methods based on the concatenated data set of PCGs from 11 species in Pelidae and two species in Styloperlidae (outgroups). The clade K. chungnanshana + K. wangi was a sister group to K. klapaleki, which is consistent with the traditional morphological classification. Taylor & Francis 2019-10-09 /pmc/articles/PMC7710318/ /pubmed/33366019 http://dx.doi.org/10.1080/23802359.2019.1674722 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. to update the CATS schedule accordingly.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Chen, Jiajia Cao, Jinjun Li, Weihai Wang, Ying Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title | Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title_full | Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title_fullStr | Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title_full_unstemmed | Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title_short | Characterization of the complete mitochondrial genome of a stonefly species, Kamimuria klapaleki (Plecoptera: Pelidae) |
title_sort | characterization of the complete mitochondrial genome of a stonefly species, kamimuria klapaleki (plecoptera: pelidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710318/ https://www.ncbi.nlm.nih.gov/pubmed/33366019 http://dx.doi.org/10.1080/23802359.2019.1674722 |
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