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Draft Genome of the European Mouflon (Ovis orientalis musimon)

Mouflon (Ovis orientalis) with its huge and beautiful horns is considered as one of the ancestors of domesticated sheep. The European mouflon (Ovis orientalis musimon) is in the Asiatic mouflon (O. orientalis) clade. In order to provide novel genome information for mouflon, moreover promote genetic...

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Detalles Bibliográficos
Autores principales: Su, Rui, Qiao, Xian, Gao, Yun, Li, Xiaokai, Jiang, Wei, Chen, Wei, Fan, Yixing, Zheng, Bingwu, Zhang, Yanjun, Liu, Zhihong, Wang, Ruijun, Wang, Zhiying, Wang, Zhixin, Wan, Wenting, Dong, Yang, Li, Jinquan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710762/
https://www.ncbi.nlm.nih.gov/pubmed/33329689
http://dx.doi.org/10.3389/fgene.2020.533611
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author Su, Rui
Qiao, Xian
Gao, Yun
Li, Xiaokai
Jiang, Wei
Chen, Wei
Fan, Yixing
Zheng, Bingwu
Zhang, Yanjun
Liu, Zhihong
Wang, Ruijun
Wang, Zhiying
Wang, Zhixin
Wan, Wenting
Dong, Yang
Li, Jinquan
author_facet Su, Rui
Qiao, Xian
Gao, Yun
Li, Xiaokai
Jiang, Wei
Chen, Wei
Fan, Yixing
Zheng, Bingwu
Zhang, Yanjun
Liu, Zhihong
Wang, Ruijun
Wang, Zhiying
Wang, Zhixin
Wan, Wenting
Dong, Yang
Li, Jinquan
author_sort Su, Rui
collection PubMed
description Mouflon (Ovis orientalis) with its huge and beautiful horns is considered as one of the ancestors of domesticated sheep. The European mouflon (Ovis orientalis musimon) is in the Asiatic mouflon (O. orientalis) clade. In order to provide novel genome information for mouflon, moreover promote genetic analysis of genus Ovis both domestic and wild, we propose to sequence the mouflon genome. We assembled the highly heterozygous mouflon genome based on Illumina HiSeq platform using the next-generation sequencing technology. Finally, the draft genome we accessed approximately 2.69 Gb (42.15% GC), while N50 sizes of contig and scaffold are 110.1 kb and 10.4 Mb, respectively. The contiguity of this assembly is obviously better than earlier versions. Further analyses predicted 20,814 protein-coding genes in the mouflon genome and 12,390 shared gene families among bovine species. It is estimated that the divergence time between O. orientalis musimon and Ovis aries was 7.6 million years ago. The draft mouflon genome assembly will provide data support and theoretical basis for various investigations of the genus Ovis species in future.
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spelling pubmed-77107622020-12-15 Draft Genome of the European Mouflon (Ovis orientalis musimon) Su, Rui Qiao, Xian Gao, Yun Li, Xiaokai Jiang, Wei Chen, Wei Fan, Yixing Zheng, Bingwu Zhang, Yanjun Liu, Zhihong Wang, Ruijun Wang, Zhiying Wang, Zhixin Wan, Wenting Dong, Yang Li, Jinquan Front Genet Genetics Mouflon (Ovis orientalis) with its huge and beautiful horns is considered as one of the ancestors of domesticated sheep. The European mouflon (Ovis orientalis musimon) is in the Asiatic mouflon (O. orientalis) clade. In order to provide novel genome information for mouflon, moreover promote genetic analysis of genus Ovis both domestic and wild, we propose to sequence the mouflon genome. We assembled the highly heterozygous mouflon genome based on Illumina HiSeq platform using the next-generation sequencing technology. Finally, the draft genome we accessed approximately 2.69 Gb (42.15% GC), while N50 sizes of contig and scaffold are 110.1 kb and 10.4 Mb, respectively. The contiguity of this assembly is obviously better than earlier versions. Further analyses predicted 20,814 protein-coding genes in the mouflon genome and 12,390 shared gene families among bovine species. It is estimated that the divergence time between O. orientalis musimon and Ovis aries was 7.6 million years ago. The draft mouflon genome assembly will provide data support and theoretical basis for various investigations of the genus Ovis species in future. Frontiers Media S.A. 2020-11-19 /pmc/articles/PMC7710762/ /pubmed/33329689 http://dx.doi.org/10.3389/fgene.2020.533611 Text en Copyright © 2020 Su, Qiao, Gao, Li, Jiang, Chen, Fan, Zheng, Zhang, Liu, Wang, Wang, Wang, Wan, Dong and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Su, Rui
Qiao, Xian
Gao, Yun
Li, Xiaokai
Jiang, Wei
Chen, Wei
Fan, Yixing
Zheng, Bingwu
Zhang, Yanjun
Liu, Zhihong
Wang, Ruijun
Wang, Zhiying
Wang, Zhixin
Wan, Wenting
Dong, Yang
Li, Jinquan
Draft Genome of the European Mouflon (Ovis orientalis musimon)
title Draft Genome of the European Mouflon (Ovis orientalis musimon)
title_full Draft Genome of the European Mouflon (Ovis orientalis musimon)
title_fullStr Draft Genome of the European Mouflon (Ovis orientalis musimon)
title_full_unstemmed Draft Genome of the European Mouflon (Ovis orientalis musimon)
title_short Draft Genome of the European Mouflon (Ovis orientalis musimon)
title_sort draft genome of the european mouflon (ovis orientalis musimon)
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7710762/
https://www.ncbi.nlm.nih.gov/pubmed/33329689
http://dx.doi.org/10.3389/fgene.2020.533611
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