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(1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein

The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international bi...

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Autores principales: Korn, Sophie M., Lambertz, Roderick, Fürtig, Boris, Hengesbach, Martin, Löhr, Frank, Richter, Christian, Schwalbe, Harald, Weigand, Julia E., Wöhnert, Jens, Schlundt, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711055/
https://www.ncbi.nlm.nih.gov/pubmed/33270159
http://dx.doi.org/10.1007/s12104-020-09995-y
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author Korn, Sophie M.
Lambertz, Roderick
Fürtig, Boris
Hengesbach, Martin
Löhr, Frank
Richter, Christian
Schwalbe, Harald
Weigand, Julia E.
Wöhnert, Jens
Schlundt, Andreas
author_facet Korn, Sophie M.
Lambertz, Roderick
Fürtig, Boris
Hengesbach, Martin
Löhr, Frank
Richter, Christian
Schwalbe, Harald
Weigand, Julia E.
Wöhnert, Jens
Schlundt, Andreas
author_sort Korn, Sophie M.
collection PubMed
description The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international biomedical research community. Within the international Covid19-NMR consortium, scientists support drug development against SARS-CoV-2 by providing publicly available NMR data on viral proteins and RNAs. The coronavirus nucleocapsid protein (N protein) is an RNA-binding protein involved in viral transcription and replication. Its primary function is the packaging of the viral RNA genome. The highly conserved architecture of the coronavirus N protein consists of an N-terminal RNA-binding domain (NTD), followed by an intrinsically disordered Serine/Arginine (SR)-rich linker and a C-terminal dimerization domain (CTD). Besides its involvement in oligomerization, the CTD of the N protein (N-CTD) is also able to bind to nucleic acids by itself, independent of the NTD. Here, we report the near-complete NMR backbone chemical shift assignments of the SARS-CoV-2 N-CTD to provide the basis for downstream applications, in particular site-resolved drug binding studies.
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spelling pubmed-77110552020-12-03 (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein Korn, Sophie M. Lambertz, Roderick Fürtig, Boris Hengesbach, Martin Löhr, Frank Richter, Christian Schwalbe, Harald Weigand, Julia E. Wöhnert, Jens Schlundt, Andreas Biomol NMR Assign Article The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international biomedical research community. Within the international Covid19-NMR consortium, scientists support drug development against SARS-CoV-2 by providing publicly available NMR data on viral proteins and RNAs. The coronavirus nucleocapsid protein (N protein) is an RNA-binding protein involved in viral transcription and replication. Its primary function is the packaging of the viral RNA genome. The highly conserved architecture of the coronavirus N protein consists of an N-terminal RNA-binding domain (NTD), followed by an intrinsically disordered Serine/Arginine (SR)-rich linker and a C-terminal dimerization domain (CTD). Besides its involvement in oligomerization, the CTD of the N protein (N-CTD) is also able to bind to nucleic acids by itself, independent of the NTD. Here, we report the near-complete NMR backbone chemical shift assignments of the SARS-CoV-2 N-CTD to provide the basis for downstream applications, in particular site-resolved drug binding studies. Springer Netherlands 2020-12-03 2021 /pmc/articles/PMC7711055/ /pubmed/33270159 http://dx.doi.org/10.1007/s12104-020-09995-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Korn, Sophie M.
Lambertz, Roderick
Fürtig, Boris
Hengesbach, Martin
Löhr, Frank
Richter, Christian
Schwalbe, Harald
Weigand, Julia E.
Wöhnert, Jens
Schlundt, Andreas
(1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title_full (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title_fullStr (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title_full_unstemmed (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title_short (1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
title_sort (1)h, (13)c, and (15)n backbone chemical shift assignments of the c-terminal dimerization domain of sars-cov-2 nucleocapsid protein
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711055/
https://www.ncbi.nlm.nih.gov/pubmed/33270159
http://dx.doi.org/10.1007/s12104-020-09995-y
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