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Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction

OBJECTIVE: The aim of this study was to identify relevant risk factors for epileptic seizures upon initial diagnosis of a brain tumor and to develop and validate a machine learning based prediction to allow for a tailored risk-based antiepileptic therapy. METHODS: Clinical, electrophysiological and...

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Autores principales: Akeret, Kevin, Stumpo, Vittorio, Staartjes, Victor E., Vasella, Flavio, Velz, Julia, Marinoni, Federica, Dufour, Jean-Philippe, Imbach, Lukas L., Regli, Luca, Serra, Carlo, Krayenbühl, Niklaus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711280/
https://www.ncbi.nlm.nih.gov/pubmed/33395995
http://dx.doi.org/10.1016/j.nicl.2020.102506
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author Akeret, Kevin
Stumpo, Vittorio
Staartjes, Victor E.
Vasella, Flavio
Velz, Julia
Marinoni, Federica
Dufour, Jean-Philippe
Imbach, Lukas L.
Regli, Luca
Serra, Carlo
Krayenbühl, Niklaus
author_facet Akeret, Kevin
Stumpo, Vittorio
Staartjes, Victor E.
Vasella, Flavio
Velz, Julia
Marinoni, Federica
Dufour, Jean-Philippe
Imbach, Lukas L.
Regli, Luca
Serra, Carlo
Krayenbühl, Niklaus
author_sort Akeret, Kevin
collection PubMed
description OBJECTIVE: The aim of this study was to identify relevant risk factors for epileptic seizures upon initial diagnosis of a brain tumor and to develop and validate a machine learning based prediction to allow for a tailored risk-based antiepileptic therapy. METHODS: Clinical, electrophysiological and high-resolution imaging data was obtained from a consecutive cohort of 1051 patients with newly diagnosed brain tumors. Factor-associated seizure risk difference allowed to determine the relevance of specific topographic, demographic and histopathologic variables available at the time of diagnosis for seizure risk. The data was divided in a 70/30 ratio into a training and test set. Different machine learning based predictive models were evaluated before a generalized additive model (GAM) was selected considering its traceability while maintaining high performance. Based on a clinical stratification of the risk factors, three different GAM were trained and internally validated. RESULTS: A total of 923 patients had full data and were included. Specific topographic anatomical patterns that drive seizure risk could be identified. The involvement of allopallial, mesopallial or primary motor/somatosensory neopallial structures by brain tumors results in a significant and clinically relevant increase in seizure risk. While topographic input was most relevant for the GAM, the best prediction was achieved by a combination of topographic, demographic and histopathologic information (Validation: AUC: 0.79, Accuracy: 0.72, Sensitivity: 0.81, Specificity: 0.66). CONCLUSIONS: This study identifies specific phylogenetic anatomical patterns as epileptic drivers. A GAM allowed the prediction of seizure risk using topographic, demographic and histopathologic data achieving fair performance while maintaining transparency.
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spelling pubmed-77112802020-12-09 Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction Akeret, Kevin Stumpo, Vittorio Staartjes, Victor E. Vasella, Flavio Velz, Julia Marinoni, Federica Dufour, Jean-Philippe Imbach, Lukas L. Regli, Luca Serra, Carlo Krayenbühl, Niklaus Neuroimage Clin Regular Article OBJECTIVE: The aim of this study was to identify relevant risk factors for epileptic seizures upon initial diagnosis of a brain tumor and to develop and validate a machine learning based prediction to allow for a tailored risk-based antiepileptic therapy. METHODS: Clinical, electrophysiological and high-resolution imaging data was obtained from a consecutive cohort of 1051 patients with newly diagnosed brain tumors. Factor-associated seizure risk difference allowed to determine the relevance of specific topographic, demographic and histopathologic variables available at the time of diagnosis for seizure risk. The data was divided in a 70/30 ratio into a training and test set. Different machine learning based predictive models were evaluated before a generalized additive model (GAM) was selected considering its traceability while maintaining high performance. Based on a clinical stratification of the risk factors, three different GAM were trained and internally validated. RESULTS: A total of 923 patients had full data and were included. Specific topographic anatomical patterns that drive seizure risk could be identified. The involvement of allopallial, mesopallial or primary motor/somatosensory neopallial structures by brain tumors results in a significant and clinically relevant increase in seizure risk. While topographic input was most relevant for the GAM, the best prediction was achieved by a combination of topographic, demographic and histopathologic information (Validation: AUC: 0.79, Accuracy: 0.72, Sensitivity: 0.81, Specificity: 0.66). CONCLUSIONS: This study identifies specific phylogenetic anatomical patterns as epileptic drivers. A GAM allowed the prediction of seizure risk using topographic, demographic and histopathologic data achieving fair performance while maintaining transparency. Elsevier 2020-11-19 /pmc/articles/PMC7711280/ /pubmed/33395995 http://dx.doi.org/10.1016/j.nicl.2020.102506 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Akeret, Kevin
Stumpo, Vittorio
Staartjes, Victor E.
Vasella, Flavio
Velz, Julia
Marinoni, Federica
Dufour, Jean-Philippe
Imbach, Lukas L.
Regli, Luca
Serra, Carlo
Krayenbühl, Niklaus
Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title_full Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title_fullStr Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title_full_unstemmed Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title_short Topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
title_sort topographic brain tumor anatomy drives seizure risk and enables machine learning based prediction
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711280/
https://www.ncbi.nlm.nih.gov/pubmed/33395995
http://dx.doi.org/10.1016/j.nicl.2020.102506
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