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Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images

A new solution to overcome the constraints of multimodality medical intra-subject image registration is proposed, using the mutual information (MI) of image histogram-oriented gradients as a new matching criterion. We present a rigid, multi-modal image registration algorithm based on linear transfor...

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Autores principales: Moldovanu, Simona, Toporaș, Lenuta Pană, Biswas, Anjan, Moraru, Luminita
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711905/
https://www.ncbi.nlm.nih.gov/pubmed/33287067
http://dx.doi.org/10.3390/e22111299
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author Moldovanu, Simona
Toporaș, Lenuta Pană
Biswas, Anjan
Moraru, Luminita
author_facet Moldovanu, Simona
Toporaș, Lenuta Pană
Biswas, Anjan
Moraru, Luminita
author_sort Moldovanu, Simona
collection PubMed
description A new solution to overcome the constraints of multimodality medical intra-subject image registration is proposed, using the mutual information (MI) of image histogram-oriented gradients as a new matching criterion. We present a rigid, multi-modal image registration algorithm based on linear transformation and oriented gradients for the alignment of T2-weighted (T2w) images (as a fixed reference) and diffusion tensor imaging (DTI) (b-values of 500 and 1250 s/mm(2)) as floating images of three patients to compensate for the motion during the acquisition process. Diffusion MRI is very sensitive to motion, especially when the intensity and duration of the gradient pulses (characterized by the b-value) increases. The proposed method relies on the whole brain surface and addresses the variability of anatomical features into an image stack. The sparse features refer to corners detected using the Harris corner detector operator, while dense features use all image pixels through the image histogram of oriented gradients (HOG) as a measure of the degree of statistical dependence between a pair of registered images. HOG as a dense feature is focused on the structure and extracts the oriented gradient image in the x and y directions. MI is used as an objective function for the optimization process. The entropy functions and joint entropy function are determined using the HOGs data. To determine the best image transformation, the fiducial registration error (FRE) measure is used. We compare the results against the MI-based intensities results computed using a statistical intensity relationship between corresponding pixels in source and target images. Our approach, which is devoted to the whole brain, shows improved registration accuracy, robustness, and computational cost compared with the registration algorithms, which use anatomical features or regions of interest areas with specific neuroanatomy. Despite the supplementary HOG computation task, the computation time is comparable for MI-based intensities and MI-based HOG methods.
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spelling pubmed-77119052021-02-24 Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images Moldovanu, Simona Toporaș, Lenuta Pană Biswas, Anjan Moraru, Luminita Entropy (Basel) Article A new solution to overcome the constraints of multimodality medical intra-subject image registration is proposed, using the mutual information (MI) of image histogram-oriented gradients as a new matching criterion. We present a rigid, multi-modal image registration algorithm based on linear transformation and oriented gradients for the alignment of T2-weighted (T2w) images (as a fixed reference) and diffusion tensor imaging (DTI) (b-values of 500 and 1250 s/mm(2)) as floating images of three patients to compensate for the motion during the acquisition process. Diffusion MRI is very sensitive to motion, especially when the intensity and duration of the gradient pulses (characterized by the b-value) increases. The proposed method relies on the whole brain surface and addresses the variability of anatomical features into an image stack. The sparse features refer to corners detected using the Harris corner detector operator, while dense features use all image pixels through the image histogram of oriented gradients (HOG) as a measure of the degree of statistical dependence between a pair of registered images. HOG as a dense feature is focused on the structure and extracts the oriented gradient image in the x and y directions. MI is used as an objective function for the optimization process. The entropy functions and joint entropy function are determined using the HOGs data. To determine the best image transformation, the fiducial registration error (FRE) measure is used. We compare the results against the MI-based intensities results computed using a statistical intensity relationship between corresponding pixels in source and target images. Our approach, which is devoted to the whole brain, shows improved registration accuracy, robustness, and computational cost compared with the registration algorithms, which use anatomical features or regions of interest areas with specific neuroanatomy. Despite the supplementary HOG computation task, the computation time is comparable for MI-based intensities and MI-based HOG methods. MDPI 2020-11-14 /pmc/articles/PMC7711905/ /pubmed/33287067 http://dx.doi.org/10.3390/e22111299 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Moldovanu, Simona
Toporaș, Lenuta Pană
Biswas, Anjan
Moraru, Luminita
Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title_full Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title_fullStr Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title_full_unstemmed Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title_short Combining Sparse and Dense Features to Improve Multi-Modal Registration for Brain DTI Images
title_sort combining sparse and dense features to improve multi-modal registration for brain dti images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7711905/
https://www.ncbi.nlm.nih.gov/pubmed/33287067
http://dx.doi.org/10.3390/e22111299
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