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Variant Interpretation in Current Pharmacogenetic Testing
In the current marketplace, there are now more than a dozen commercial companies providing pharmacogenetic tests. Each company varies in the panel of genes they test and the variants they are able to screen for. The reports generated by these companies provide phenotypic interpretations of pharmacog...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712137/ https://www.ncbi.nlm.nih.gov/pubmed/33142667 http://dx.doi.org/10.3390/jpm10040204 |
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author | Luvsantseren, Sally Whirl-Carrillo, Michelle Sangkuhl, Katrin Shin, Nancy Wen, Alice Empey, Philip Alam, Benish David, Sean Dunnenberger, Henry M. Orlando, Lori Altman, Russ Palaniappan, Latha |
author_facet | Luvsantseren, Sally Whirl-Carrillo, Michelle Sangkuhl, Katrin Shin, Nancy Wen, Alice Empey, Philip Alam, Benish David, Sean Dunnenberger, Henry M. Orlando, Lori Altman, Russ Palaniappan, Latha |
author_sort | Luvsantseren, Sally |
collection | PubMed |
description | In the current marketplace, there are now more than a dozen commercial companies providing pharmacogenetic tests. Each company varies in the panel of genes they test and the variants they are able to screen for. The reports generated by these companies provide phenotypic interpretations of pharmacogenes and clinically actionable gene–drug interactions based on internally curated data and proprietary algorithms. The freedom to choose the types of evidence to include versus exclude in interpreting genomics has created reporting discrepancies in the industry. The case report presented here reveals the discordant phenotype analysis provided by two pharmacogenetic testing companies. The uncertainty and unnecessary distress experienced by the patient highlights the need for consensus in phenotype reporting within the industry. |
format | Online Article Text |
id | pubmed-7712137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-77121372020-12-04 Variant Interpretation in Current Pharmacogenetic Testing Luvsantseren, Sally Whirl-Carrillo, Michelle Sangkuhl, Katrin Shin, Nancy Wen, Alice Empey, Philip Alam, Benish David, Sean Dunnenberger, Henry M. Orlando, Lori Altman, Russ Palaniappan, Latha J Pers Med Case Report In the current marketplace, there are now more than a dozen commercial companies providing pharmacogenetic tests. Each company varies in the panel of genes they test and the variants they are able to screen for. The reports generated by these companies provide phenotypic interpretations of pharmacogenes and clinically actionable gene–drug interactions based on internally curated data and proprietary algorithms. The freedom to choose the types of evidence to include versus exclude in interpreting genomics has created reporting discrepancies in the industry. The case report presented here reveals the discordant phenotype analysis provided by two pharmacogenetic testing companies. The uncertainty and unnecessary distress experienced by the patient highlights the need for consensus in phenotype reporting within the industry. MDPI 2020-10-31 /pmc/articles/PMC7712137/ /pubmed/33142667 http://dx.doi.org/10.3390/jpm10040204 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Case Report Luvsantseren, Sally Whirl-Carrillo, Michelle Sangkuhl, Katrin Shin, Nancy Wen, Alice Empey, Philip Alam, Benish David, Sean Dunnenberger, Henry M. Orlando, Lori Altman, Russ Palaniappan, Latha Variant Interpretation in Current Pharmacogenetic Testing |
title | Variant Interpretation in Current Pharmacogenetic Testing |
title_full | Variant Interpretation in Current Pharmacogenetic Testing |
title_fullStr | Variant Interpretation in Current Pharmacogenetic Testing |
title_full_unstemmed | Variant Interpretation in Current Pharmacogenetic Testing |
title_short | Variant Interpretation in Current Pharmacogenetic Testing |
title_sort | variant interpretation in current pharmacogenetic testing |
topic | Case Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712137/ https://www.ncbi.nlm.nih.gov/pubmed/33142667 http://dx.doi.org/10.3390/jpm10040204 |
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