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Evolution of Developmental GATA Factors in Nematodes
GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological n...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712238/ https://www.ncbi.nlm.nih.gov/pubmed/33207804 http://dx.doi.org/10.3390/jdb8040027 |
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author | Eurmsirilerd, Ethan Maduro, Morris F. |
author_facet | Eurmsirilerd, Ethan Maduro, Morris F. |
author_sort | Eurmsirilerd, Ethan |
collection | PubMed |
description | GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system C. elegans and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in C. elegans suggests that the nematode GATA factors share similar functions in development. |
format | Online Article Text |
id | pubmed-7712238 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-77122382020-12-04 Evolution of Developmental GATA Factors in Nematodes Eurmsirilerd, Ethan Maduro, Morris F. J Dev Biol Article GATA transcription factors are found in animals, plants, and fungi. In animals, they have important developmental roles in controlling specification of cell identities and executing tissue-specific differentiation. The Phylum Nematoda is a diverse group of vermiform animals that inhabit ecological niches all over the world. Both free-living and parasitic species are known, including those that cause human infectious disease. To date, GATA factors in nematodes have been studied almost exclusively in the model system C. elegans and its close relatives. In this study, we use newly available sequences to identify GATA factors across the nematode phylum. We find that most species have fewer than six GATA factors, but some species have 10 or more. Comparisons of gene and protein structure suggest that there were at most two GATA factors at the base of the phylum, which expanded by duplication and modification to result in a core set of four factors. The high degree of structural similarity with the corresponding orthologues in C. elegans suggests that the nematode GATA factors share similar functions in development. MDPI 2020-11-16 /pmc/articles/PMC7712238/ /pubmed/33207804 http://dx.doi.org/10.3390/jdb8040027 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Eurmsirilerd, Ethan Maduro, Morris F. Evolution of Developmental GATA Factors in Nematodes |
title | Evolution of Developmental GATA Factors in Nematodes |
title_full | Evolution of Developmental GATA Factors in Nematodes |
title_fullStr | Evolution of Developmental GATA Factors in Nematodes |
title_full_unstemmed | Evolution of Developmental GATA Factors in Nematodes |
title_short | Evolution of Developmental GATA Factors in Nematodes |
title_sort | evolution of developmental gata factors in nematodes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712238/ https://www.ncbi.nlm.nih.gov/pubmed/33207804 http://dx.doi.org/10.3390/jdb8040027 |
work_keys_str_mv | AT eurmsirilerdethan evolutionofdevelopmentalgatafactorsinnematodes AT maduromorrisf evolutionofdevelopmentalgatafactorsinnematodes |