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Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores
Ionic transport in nano- to sub-nano-scale pores is highly dependent on translocation barriers and potential wells. These features in the free-energy landscape are primarily the result of ion dehydration and electrostatic interactions. For pores in atomically thin membranes, such as graphene, other...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712548/ https://www.ncbi.nlm.nih.gov/pubmed/33287091 http://dx.doi.org/10.3390/e22111326 |
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author | Sahu, Subin Zwolak, Michael |
author_facet | Sahu, Subin Zwolak, Michael |
author_sort | Sahu, Subin |
collection | PubMed |
description | Ionic transport in nano- to sub-nano-scale pores is highly dependent on translocation barriers and potential wells. These features in the free-energy landscape are primarily the result of ion dehydration and electrostatic interactions. For pores in atomically thin membranes, such as graphene, other factors come into play. Ion dynamics both inside and outside the geometric volume of the pore can be critical in determining the transport properties of the channel due to several commensurate length scales, such as the effective membrane thickness, radii of the first and the second hydration layers, pore radius, and Debye length. In particular, for biomimetic pores, such as the graphene crown ether we examine here, there are regimes where transport is highly sensitive to the pore size due to the interplay of dehydration and interaction with pore charge. Picometer changes in the size, e.g., due to a minute strain, can lead to a large change in conductance. Outside of these regimes, the small pore size itself gives a large resistance, even when electrostatic factors and dehydration compensate each other to give a relatively flat—e.g., near barrierless—free energy landscape. The permeability, though, can still be large and ions will translocate rapidly after they arrive within the capture radius of the pore. This, in turn, leads to diffusion and drift effects dominating the conductance. The current thus plateaus and becomes effectively independent of pore-free energy characteristics. Measurement of this effect will give an estimate of the magnitude of kinetically limiting features, and experimentally constrain the local electromechanical conditions. |
format | Online Article Text |
id | pubmed-7712548 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-77125482021-02-24 Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores Sahu, Subin Zwolak, Michael Entropy (Basel) Article Ionic transport in nano- to sub-nano-scale pores is highly dependent on translocation barriers and potential wells. These features in the free-energy landscape are primarily the result of ion dehydration and electrostatic interactions. For pores in atomically thin membranes, such as graphene, other factors come into play. Ion dynamics both inside and outside the geometric volume of the pore can be critical in determining the transport properties of the channel due to several commensurate length scales, such as the effective membrane thickness, radii of the first and the second hydration layers, pore radius, and Debye length. In particular, for biomimetic pores, such as the graphene crown ether we examine here, there are regimes where transport is highly sensitive to the pore size due to the interplay of dehydration and interaction with pore charge. Picometer changes in the size, e.g., due to a minute strain, can lead to a large change in conductance. Outside of these regimes, the small pore size itself gives a large resistance, even when electrostatic factors and dehydration compensate each other to give a relatively flat—e.g., near barrierless—free energy landscape. The permeability, though, can still be large and ions will translocate rapidly after they arrive within the capture radius of the pore. This, in turn, leads to diffusion and drift effects dominating the conductance. The current thus plateaus and becomes effectively independent of pore-free energy characteristics. Measurement of this effect will give an estimate of the magnitude of kinetically limiting features, and experimentally constrain the local electromechanical conditions. MDPI 2020-11-20 /pmc/articles/PMC7712548/ /pubmed/33287091 http://dx.doi.org/10.3390/e22111326 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sahu, Subin Zwolak, Michael Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title | Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title_full | Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title_fullStr | Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title_full_unstemmed | Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title_short | Diffusion Limitations and Translocation Barriers in Atomically Thin Biomimetic Pores |
title_sort | diffusion limitations and translocation barriers in atomically thin biomimetic pores |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7712548/ https://www.ncbi.nlm.nih.gov/pubmed/33287091 http://dx.doi.org/10.3390/e22111326 |
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