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Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli

Many photosynthetic organisms employ a CO(2) concentrating mechanism (CCM) to increase the rate of CO(2) fixation via the Calvin cycle. CCMs catalyze ≈50% of global photosynthesis, yet it remains unclear which genes and proteins are required to produce this complex adaptation. We describe the constr...

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Autores principales: Flamholz, Avi I, Dugan, Eli, Blikstad, Cecilia, Gleizer, Shmuel, Ben-Nissan, Roee, Amram, Shira, Antonovsky, Niv, Ravishankar, Sumedha, Noor, Elad, Bar-Even, Arren, Milo, Ron, Savage, David F
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7714395/
https://www.ncbi.nlm.nih.gov/pubmed/33084575
http://dx.doi.org/10.7554/eLife.59882
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author Flamholz, Avi I
Dugan, Eli
Blikstad, Cecilia
Gleizer, Shmuel
Ben-Nissan, Roee
Amram, Shira
Antonovsky, Niv
Ravishankar, Sumedha
Noor, Elad
Bar-Even, Arren
Milo, Ron
Savage, David F
author_facet Flamholz, Avi I
Dugan, Eli
Blikstad, Cecilia
Gleizer, Shmuel
Ben-Nissan, Roee
Amram, Shira
Antonovsky, Niv
Ravishankar, Sumedha
Noor, Elad
Bar-Even, Arren
Milo, Ron
Savage, David F
author_sort Flamholz, Avi I
collection PubMed
description Many photosynthetic organisms employ a CO(2) concentrating mechanism (CCM) to increase the rate of CO(2) fixation via the Calvin cycle. CCMs catalyze ≈50% of global photosynthesis, yet it remains unclear which genes and proteins are required to produce this complex adaptation. We describe the construction of a functional CCM in a non-native host, achieved by expressing genes from an autotrophic bacterium in an Escherichia coli strain engineered to depend on rubisco carboxylation for growth. Expression of 20 CCM genes enabled E. coli to grow by fixing CO(2) from ambient air into biomass, with growth in ambient air depending on the components of the CCM. Bacterial CCMs are therefore genetically compact and readily transplanted, rationalizing their presence in diverse bacteria. Reconstitution enabled genetic experiments refining our understanding of the CCM, thereby laying the groundwork for deeper study and engineering of the cell biology supporting CO(2) assimilation in diverse organisms.
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spelling pubmed-77143952020-12-07 Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli Flamholz, Avi I Dugan, Eli Blikstad, Cecilia Gleizer, Shmuel Ben-Nissan, Roee Amram, Shira Antonovsky, Niv Ravishankar, Sumedha Noor, Elad Bar-Even, Arren Milo, Ron Savage, David F eLife Biochemistry and Chemical Biology Many photosynthetic organisms employ a CO(2) concentrating mechanism (CCM) to increase the rate of CO(2) fixation via the Calvin cycle. CCMs catalyze ≈50% of global photosynthesis, yet it remains unclear which genes and proteins are required to produce this complex adaptation. We describe the construction of a functional CCM in a non-native host, achieved by expressing genes from an autotrophic bacterium in an Escherichia coli strain engineered to depend on rubisco carboxylation for growth. Expression of 20 CCM genes enabled E. coli to grow by fixing CO(2) from ambient air into biomass, with growth in ambient air depending on the components of the CCM. Bacterial CCMs are therefore genetically compact and readily transplanted, rationalizing their presence in diverse bacteria. Reconstitution enabled genetic experiments refining our understanding of the CCM, thereby laying the groundwork for deeper study and engineering of the cell biology supporting CO(2) assimilation in diverse organisms. eLife Sciences Publications, Ltd 2020-10-21 /pmc/articles/PMC7714395/ /pubmed/33084575 http://dx.doi.org/10.7554/eLife.59882 Text en © 2020, Flamholz et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Biochemistry and Chemical Biology
Flamholz, Avi I
Dugan, Eli
Blikstad, Cecilia
Gleizer, Shmuel
Ben-Nissan, Roee
Amram, Shira
Antonovsky, Niv
Ravishankar, Sumedha
Noor, Elad
Bar-Even, Arren
Milo, Ron
Savage, David F
Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title_full Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title_fullStr Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title_full_unstemmed Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title_short Functional reconstitution of a bacterial CO(2) concentrating mechanism in Escherichia coli
title_sort functional reconstitution of a bacterial co(2) concentrating mechanism in escherichia coli
topic Biochemistry and Chemical Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7714395/
https://www.ncbi.nlm.nih.gov/pubmed/33084575
http://dx.doi.org/10.7554/eLife.59882
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