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Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients
Recent advances in metabolomics provide tools to investigate human metabolome in order to establish new parameters to study different approaches towards diagnostics, diseases and their treatment. The present study focused on the untargeted identification of metabolites in serum of patients with coro...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7715060/ https://www.ncbi.nlm.nih.gov/pubmed/33304184 http://dx.doi.org/10.1016/j.sjbs.2020.08.019 |
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author | Qamar, Wajhul Alqahtani, Saeed Ahamad, Syed Rizwan Ali, Nemat Altamimi, Mohammad A. |
author_facet | Qamar, Wajhul Alqahtani, Saeed Ahamad, Syed Rizwan Ali, Nemat Altamimi, Mohammad A. |
author_sort | Qamar, Wajhul |
collection | PubMed |
description | Recent advances in metabolomics provide tools to investigate human metabolome in order to establish new parameters to study different approaches towards diagnostics, diseases and their treatment. The present study focused on the untargeted identification of metabolites in serum of patients with coronary artery disease who were under treatment at the time of sample collection. AUCs (Area Under the Curves) from different peaks were considered for the analysis and comparison purposes. The metabolome was studied using GC–MS (Gas Chromatography Mass Spectrometry) and the metabolites were identified with NIST (The National Institute of Standards and Technology) and Wiley library matches. A total of 17 metabolites were identified and focused on to compare with the metabolome of healthy individuals. T test analysis found significant differences in alanine, malonic acid, ribitol, D-glucose, mannose (P < 0.001), acetohydroxamic acid, N-carboxyglycine, and aminobutyrate (P < 0.05). Principal Component Analysis of serum metabolites data found three components out of 17 metabolites; RC1 (Acetohydroxamic acid, alanine, D-glucose, malonic acid, mannose, N-carboxy glycine and ribitol), RC2 (Heptadecanoic acid, hexadecanoic acid, octadecanoic acid and Trans-9-octadecanoic acid), RC3 (Aminobutyrate, D-sorbit, gamma lactone, valine, benzene propanoic acid and lactic acid). No correlation was found among the components. |
format | Online Article Text |
id | pubmed-7715060 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-77150602020-12-09 Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients Qamar, Wajhul Alqahtani, Saeed Ahamad, Syed Rizwan Ali, Nemat Altamimi, Mohammad A. Saudi J Biol Sci Original Article Recent advances in metabolomics provide tools to investigate human metabolome in order to establish new parameters to study different approaches towards diagnostics, diseases and their treatment. The present study focused on the untargeted identification of metabolites in serum of patients with coronary artery disease who were under treatment at the time of sample collection. AUCs (Area Under the Curves) from different peaks were considered for the analysis and comparison purposes. The metabolome was studied using GC–MS (Gas Chromatography Mass Spectrometry) and the metabolites were identified with NIST (The National Institute of Standards and Technology) and Wiley library matches. A total of 17 metabolites were identified and focused on to compare with the metabolome of healthy individuals. T test analysis found significant differences in alanine, malonic acid, ribitol, D-glucose, mannose (P < 0.001), acetohydroxamic acid, N-carboxyglycine, and aminobutyrate (P < 0.05). Principal Component Analysis of serum metabolites data found three components out of 17 metabolites; RC1 (Acetohydroxamic acid, alanine, D-glucose, malonic acid, mannose, N-carboxy glycine and ribitol), RC2 (Heptadecanoic acid, hexadecanoic acid, octadecanoic acid and Trans-9-octadecanoic acid), RC3 (Aminobutyrate, D-sorbit, gamma lactone, valine, benzene propanoic acid and lactic acid). No correlation was found among the components. Elsevier 2020-12 2020-08-19 /pmc/articles/PMC7715060/ /pubmed/33304184 http://dx.doi.org/10.1016/j.sjbs.2020.08.019 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Qamar, Wajhul Alqahtani, Saeed Ahamad, Syed Rizwan Ali, Nemat Altamimi, Mohammad A. Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title | Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title_full | Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title_fullStr | Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title_full_unstemmed | Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title_short | Untargeted GC–MS investigation of serum metabolomics of coronary artery disease patients |
title_sort | untargeted gc–ms investigation of serum metabolomics of coronary artery disease patients |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7715060/ https://www.ncbi.nlm.nih.gov/pubmed/33304184 http://dx.doi.org/10.1016/j.sjbs.2020.08.019 |
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