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DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG
BACKGROUND: Diffuse intrinsic pontine gliomas (DIPGs) are lethal pediatric brain tumors with no curative therapies. Inhibitor of DNA binding (ID) proteins are key regulators of gene differentiation during embryogenesis. Previous work has shown that H3F3A and ACVR1 mutations increase ID1 expression i...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7715087/ http://dx.doi.org/10.1093/neuonc/noaa222.104 |
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author | Harris, Micah K Yadav, Viveka Nand Stallard, Stefanie Woo, Rinette Siddaway, Robert Qin, Tingting Mullan, Brendan Miklja, Zachary Siada, Ruby Ravindran, Ramya Cao, Xuhong Pasternak, Amy Castro, Maria G Lowenstein, Pedro R Mody, Rajen Chinnaiyan, Arul Hawkins, Cynthia Desprez, Pierre McAllister, Sean Venneti, Sriram Koschmann, Carl |
author_facet | Harris, Micah K Yadav, Viveka Nand Stallard, Stefanie Woo, Rinette Siddaway, Robert Qin, Tingting Mullan, Brendan Miklja, Zachary Siada, Ruby Ravindran, Ramya Cao, Xuhong Pasternak, Amy Castro, Maria G Lowenstein, Pedro R Mody, Rajen Chinnaiyan, Arul Hawkins, Cynthia Desprez, Pierre McAllister, Sean Venneti, Sriram Koschmann, Carl |
author_sort | Harris, Micah K |
collection | PubMed |
description | BACKGROUND: Diffuse intrinsic pontine gliomas (DIPGs) are lethal pediatric brain tumors with no curative therapies. Inhibitor of DNA binding (ID) proteins are key regulators of gene differentiation during embryogenesis. Previous work has shown that H3F3A and ACVR1 mutations increase ID1 expression in cultured astrocytes, but this has not been validated in human DIPG, nor has the regulation and targetability of ID1 been explored in DIPG. RESULTS: Analysis of post-mortem tissue and multiple human datasets showed ID1 to be elevated in DIPG, and to correlate with reduced survival. In a multi-focal autopsy of a DIPG case, we also found ID1 expression to be heterogeneous and to correlate with tumor invasion. Chromatin immunoprecipitation qPCR (ChIP-qPCR) revealed elevated H3K27ac and low H3K27me3 at ID1 regulatory regions (enhancers/promoters) in DIPG tissue compared to normal brain, regardless of H3 or ACVR1 mutation status. Analysis of publicly-available ISH and ChIP-sequencing data of developing murine brains revealed H3K27ac at ID1 enhancers to be elevated in the prenatal hindbrain compared to prenatal forebrain and midbrain, and all postnatal brain regions. ID1 shRNA-mediated knockdown of primary human H3K27M DIPG cells (DIPG007) significantly reduced invasion and migration. We also treated DIPG007 cells with cannabidiol (CBD) and found reduced viability at clinically relevant dosing (IC50=2.4 uM) with dose-dependent reduction in ID1 protein. CONCLUSIONS: These findings indicate that a multifactorial (genetic and regionally-based) epigenetic upregulation of ID1 drives DIPG invasiveness and is targetable with CBD. ID1 knockdown and CBD treatment experiments in murine models of DIPG are ongoing. |
format | Online Article Text |
id | pubmed-7715087 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77150872020-12-09 DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG Harris, Micah K Yadav, Viveka Nand Stallard, Stefanie Woo, Rinette Siddaway, Robert Qin, Tingting Mullan, Brendan Miklja, Zachary Siada, Ruby Ravindran, Ramya Cao, Xuhong Pasternak, Amy Castro, Maria G Lowenstein, Pedro R Mody, Rajen Chinnaiyan, Arul Hawkins, Cynthia Desprez, Pierre McAllister, Sean Venneti, Sriram Koschmann, Carl Neuro Oncol Diffuse Midline Glioma/DIPG BACKGROUND: Diffuse intrinsic pontine gliomas (DIPGs) are lethal pediatric brain tumors with no curative therapies. Inhibitor of DNA binding (ID) proteins are key regulators of gene differentiation during embryogenesis. Previous work has shown that H3F3A and ACVR1 mutations increase ID1 expression in cultured astrocytes, but this has not been validated in human DIPG, nor has the regulation and targetability of ID1 been explored in DIPG. RESULTS: Analysis of post-mortem tissue and multiple human datasets showed ID1 to be elevated in DIPG, and to correlate with reduced survival. In a multi-focal autopsy of a DIPG case, we also found ID1 expression to be heterogeneous and to correlate with tumor invasion. Chromatin immunoprecipitation qPCR (ChIP-qPCR) revealed elevated H3K27ac and low H3K27me3 at ID1 regulatory regions (enhancers/promoters) in DIPG tissue compared to normal brain, regardless of H3 or ACVR1 mutation status. Analysis of publicly-available ISH and ChIP-sequencing data of developing murine brains revealed H3K27ac at ID1 enhancers to be elevated in the prenatal hindbrain compared to prenatal forebrain and midbrain, and all postnatal brain regions. ID1 shRNA-mediated knockdown of primary human H3K27M DIPG cells (DIPG007) significantly reduced invasion and migration. We also treated DIPG007 cells with cannabidiol (CBD) and found reduced viability at clinically relevant dosing (IC50=2.4 uM) with dose-dependent reduction in ID1 protein. CONCLUSIONS: These findings indicate that a multifactorial (genetic and regionally-based) epigenetic upregulation of ID1 drives DIPG invasiveness and is targetable with CBD. ID1 knockdown and CBD treatment experiments in murine models of DIPG are ongoing. Oxford University Press 2020-12-04 /pmc/articles/PMC7715087/ http://dx.doi.org/10.1093/neuonc/noaa222.104 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Diffuse Midline Glioma/DIPG Harris, Micah K Yadav, Viveka Nand Stallard, Stefanie Woo, Rinette Siddaway, Robert Qin, Tingting Mullan, Brendan Miklja, Zachary Siada, Ruby Ravindran, Ramya Cao, Xuhong Pasternak, Amy Castro, Maria G Lowenstein, Pedro R Mody, Rajen Chinnaiyan, Arul Hawkins, Cynthia Desprez, Pierre McAllister, Sean Venneti, Sriram Koschmann, Carl DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title | DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title_full | DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title_fullStr | DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title_full_unstemmed | DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title_short | DIPG-59. UPREGULATION OF PRENATAL PONTINE ID1 SIGNALING IN DIPG |
title_sort | dipg-59. upregulation of prenatal pontine id1 signaling in dipg |
topic | Diffuse Midline Glioma/DIPG |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7715087/ http://dx.doi.org/10.1093/neuonc/noaa222.104 |
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