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The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests

Knowledge of the genetic diversity in populations of crop wild relatives (CWR) can inform effective strategies for their conservation and facilitate utilization to solve agricultural challenges. Two crop wild relatives of the cultivated cranberry are widely distributed in the US. We studied 21 popul...

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Autores principales: Rodriguez-Bonilla, Lorraine, Williams, Karen A., Rodríguez Bonilla, Fabian, Matusinec, Daniel, Maule, Andrew, Coe, Kevin, Wiesman, Eric, Diaz-Garcia, Luis, Zalapa, Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716231/
https://www.ncbi.nlm.nih.gov/pubmed/33114692
http://dx.doi.org/10.3390/plants9111446
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author Rodriguez-Bonilla, Lorraine
Williams, Karen A.
Rodríguez Bonilla, Fabian
Matusinec, Daniel
Maule, Andrew
Coe, Kevin
Wiesman, Eric
Diaz-Garcia, Luis
Zalapa, Juan
author_facet Rodriguez-Bonilla, Lorraine
Williams, Karen A.
Rodríguez Bonilla, Fabian
Matusinec, Daniel
Maule, Andrew
Coe, Kevin
Wiesman, Eric
Diaz-Garcia, Luis
Zalapa, Juan
author_sort Rodriguez-Bonilla, Lorraine
collection PubMed
description Knowledge of the genetic diversity in populations of crop wild relatives (CWR) can inform effective strategies for their conservation and facilitate utilization to solve agricultural challenges. Two crop wild relatives of the cultivated cranberry are widely distributed in the US. We studied 21 populations of Vaccinium macrocarpon Aiton and 24 populations of Vaccinium oxycoccos L. across much of their native ranges in the US using 32 simple sequence repeat (SSR) markers. We observed high levels of heterozygosity for both species across populations with private alleles ranging from 0 to 26. For V. macrocarpon, we found a total of 613 alleles and high levels of heterozygosity (H(O) = 0.99, H(T) = 0.75). We also observed high numbers of alleles (881) and levels of heterozygosity (H(O) = 0.71, H(T) = 0.80) in V. oxycoccos (4x). Our genetic analyses confirmed the field identification of a native population of V. macrocarpon on the Okanogan-Wenatchee National Forest in the state of Washington, far outside the previously reported range for the species. Our results will help to inform efforts of the United States Department of Agriculture Agricultural Research Service (USDA-ARS) and the United States Forest Service (USFS) to conserve the most diverse and unique wild cranberry populations through ex situ preservation of germplasm and in situ conservation in designated sites on National Forests.
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spelling pubmed-77162312020-12-05 The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests Rodriguez-Bonilla, Lorraine Williams, Karen A. Rodríguez Bonilla, Fabian Matusinec, Daniel Maule, Andrew Coe, Kevin Wiesman, Eric Diaz-Garcia, Luis Zalapa, Juan Plants (Basel) Article Knowledge of the genetic diversity in populations of crop wild relatives (CWR) can inform effective strategies for their conservation and facilitate utilization to solve agricultural challenges. Two crop wild relatives of the cultivated cranberry are widely distributed in the US. We studied 21 populations of Vaccinium macrocarpon Aiton and 24 populations of Vaccinium oxycoccos L. across much of their native ranges in the US using 32 simple sequence repeat (SSR) markers. We observed high levels of heterozygosity for both species across populations with private alleles ranging from 0 to 26. For V. macrocarpon, we found a total of 613 alleles and high levels of heterozygosity (H(O) = 0.99, H(T) = 0.75). We also observed high numbers of alleles (881) and levels of heterozygosity (H(O) = 0.71, H(T) = 0.80) in V. oxycoccos (4x). Our genetic analyses confirmed the field identification of a native population of V. macrocarpon on the Okanogan-Wenatchee National Forest in the state of Washington, far outside the previously reported range for the species. Our results will help to inform efforts of the United States Department of Agriculture Agricultural Research Service (USDA-ARS) and the United States Forest Service (USFS) to conserve the most diverse and unique wild cranberry populations through ex situ preservation of germplasm and in situ conservation in designated sites on National Forests. MDPI 2020-10-26 /pmc/articles/PMC7716231/ /pubmed/33114692 http://dx.doi.org/10.3390/plants9111446 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rodriguez-Bonilla, Lorraine
Williams, Karen A.
Rodríguez Bonilla, Fabian
Matusinec, Daniel
Maule, Andrew
Coe, Kevin
Wiesman, Eric
Diaz-Garcia, Luis
Zalapa, Juan
The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title_full The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title_fullStr The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title_full_unstemmed The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title_short The Genetic Diversity of Cranberry Crop Wild Relatives, Vaccinium macrocarpon Aiton and V. oxycoccos L., in the US, with Special Emphasis on National Forests
title_sort genetic diversity of cranberry crop wild relatives, vaccinium macrocarpon aiton and v. oxycoccos l., in the us, with special emphasis on national forests
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716231/
https://www.ncbi.nlm.nih.gov/pubmed/33114692
http://dx.doi.org/10.3390/plants9111446
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