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Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community

Chromobacterium species are common in tropical and subtropical zones in environmental samples according to numerous studies. Here, we describe an environmental case of resident Chromobacterium vaccinii in biofilms associated with Carex spp. roots in Moscow region, Russia (warm-summer humid continent...

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Autores principales: Egorova, Daria A., Voronina, Olga L., Solovyev, Andrey I., Kunda, Marina S., Aksenova, Ekaterina I., Ryzhova, Natalia N., Danilova, Ksenya V., Rykova, Valentina S., Scherbakova, Anastasya A., Semenov, Andrey N., Polyakov, Nikita B., Grumov, Daniil A., Shevlyagina, Natalia V., Dolzhikova, Inna V., Romanova, Yulia M., Gintsburg, Alexander L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716238/
https://www.ncbi.nlm.nih.gov/pubmed/33143246
http://dx.doi.org/10.3390/microorganisms8111696
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author Egorova, Daria A.
Voronina, Olga L.
Solovyev, Andrey I.
Kunda, Marina S.
Aksenova, Ekaterina I.
Ryzhova, Natalia N.
Danilova, Ksenya V.
Rykova, Valentina S.
Scherbakova, Anastasya A.
Semenov, Andrey N.
Polyakov, Nikita B.
Grumov, Daniil A.
Shevlyagina, Natalia V.
Dolzhikova, Inna V.
Romanova, Yulia M.
Gintsburg, Alexander L.
author_facet Egorova, Daria A.
Voronina, Olga L.
Solovyev, Andrey I.
Kunda, Marina S.
Aksenova, Ekaterina I.
Ryzhova, Natalia N.
Danilova, Ksenya V.
Rykova, Valentina S.
Scherbakova, Anastasya A.
Semenov, Andrey N.
Polyakov, Nikita B.
Grumov, Daniil A.
Shevlyagina, Natalia V.
Dolzhikova, Inna V.
Romanova, Yulia M.
Gintsburg, Alexander L.
author_sort Egorova, Daria A.
collection PubMed
description Chromobacterium species are common in tropical and subtropical zones in environmental samples according to numerous studies. Here, we describe an environmental case of resident Chromobacterium vaccinii in biofilms associated with Carex spp. roots in Moscow region, Russia (warm-summer humid continental climate zone). We performed broad characterization of individual properties as well as surrounding context for better understanding of the premise of C. vaccinii survival during the winter season. Genome properties of isolated strains propose some insights into adaptation to habit and biofilm mode of life, including social cheaters carrying ΔluxR mutation. Isolated C. vaccinii differs from previously described strains in some biochemical properties and some basic characteristics like fatty acid composition as well as unique genome features. Despite potential to modulate membrane fluidity and presence of several genes responsible for cold shock response, isolated C. vaccinii did not survive during exposure to 4 °C, while in the complex biofilm sample, it was safely preserved for at least half a year in vitro at 4 °C. The surrounding bacterial community within the same biofilm with C. vaccinii represented a series of psychrophilic bacterial species, which may share resistance to low temperatures with other species within biofilm and provide C. vaccinii an opportunity to survive during the cold winter season.
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spelling pubmed-77162382020-12-05 Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community Egorova, Daria A. Voronina, Olga L. Solovyev, Andrey I. Kunda, Marina S. Aksenova, Ekaterina I. Ryzhova, Natalia N. Danilova, Ksenya V. Rykova, Valentina S. Scherbakova, Anastasya A. Semenov, Andrey N. Polyakov, Nikita B. Grumov, Daniil A. Shevlyagina, Natalia V. Dolzhikova, Inna V. Romanova, Yulia M. Gintsburg, Alexander L. Microorganisms Article Chromobacterium species are common in tropical and subtropical zones in environmental samples according to numerous studies. Here, we describe an environmental case of resident Chromobacterium vaccinii in biofilms associated with Carex spp. roots in Moscow region, Russia (warm-summer humid continental climate zone). We performed broad characterization of individual properties as well as surrounding context for better understanding of the premise of C. vaccinii survival during the winter season. Genome properties of isolated strains propose some insights into adaptation to habit and biofilm mode of life, including social cheaters carrying ΔluxR mutation. Isolated C. vaccinii differs from previously described strains in some biochemical properties and some basic characteristics like fatty acid composition as well as unique genome features. Despite potential to modulate membrane fluidity and presence of several genes responsible for cold shock response, isolated C. vaccinii did not survive during exposure to 4 °C, while in the complex biofilm sample, it was safely preserved for at least half a year in vitro at 4 °C. The surrounding bacterial community within the same biofilm with C. vaccinii represented a series of psychrophilic bacterial species, which may share resistance to low temperatures with other species within biofilm and provide C. vaccinii an opportunity to survive during the cold winter season. MDPI 2020-10-30 /pmc/articles/PMC7716238/ /pubmed/33143246 http://dx.doi.org/10.3390/microorganisms8111696 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Egorova, Daria A.
Voronina, Olga L.
Solovyev, Andrey I.
Kunda, Marina S.
Aksenova, Ekaterina I.
Ryzhova, Natalia N.
Danilova, Ksenya V.
Rykova, Valentina S.
Scherbakova, Anastasya A.
Semenov, Andrey N.
Polyakov, Nikita B.
Grumov, Daniil A.
Shevlyagina, Natalia V.
Dolzhikova, Inna V.
Romanova, Yulia M.
Gintsburg, Alexander L.
Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title_full Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title_fullStr Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title_full_unstemmed Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title_short Integrated into Environmental Biofilm Chromobacterium vaccinii Survives Winter with Support of Bacterial Community
title_sort integrated into environmental biofilm chromobacterium vaccinii survives winter with support of bacterial community
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716238/
https://www.ncbi.nlm.nih.gov/pubmed/33143246
http://dx.doi.org/10.3390/microorganisms8111696
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