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Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci

Molecular and biochemical markers are used to analyze the intraspecific genetic diversity of crops. Prolamin-coding loci are highly effective for assessing this indicator. On the basis of the Laboratory of Varietal Seed Identification of the State Agrarian University of the Northern Trans-Urals, 18...

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Autores principales: Lyubimova, A.V., Tobolova, G.V., Eremin, D.I., Loskutov, I.G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716543/
https://www.ncbi.nlm.nih.gov/pubmed/33659791
http://dx.doi.org/10.18699/VJ20.607
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author Lyubimova, A.V.
Tobolova, G.V.
Eremin, D.I.
Loskutov, I.G.
author_facet Lyubimova, A.V.
Tobolova, G.V.
Eremin, D.I.
Loskutov, I.G.
author_sort Lyubimova, A.V.
collection PubMed
description Molecular and biochemical markers are used to analyze the intraspecific genetic diversity of crops. Prolamin-coding loci are highly effective for assessing this indicator. On the basis of the Laboratory of Varietal Seed Identification of the State Agrarian University of the Northern Trans-Urals, 18 varieties of common oat included in the State Register of Selection Achievements in the Tyumen Region from the 1930s to 2019 were studied by electrophoresis in 2018–2019. The aim of the work was to study the dynamics of the genetic diversity of oat varieties at avenin-coding loci. For the analysis, 100 grains of each variety were used. Electrophoresis was carried out in vertical plates of 13.2 % polyacrylamide gel at a constant voltage of 500 V for 4.0–4.5 h. It was found that 44.4 % of the varieties are heterogeneous, each consisting of two biotypes. For three loci, 20 alleles were identified, 10 of which were detected for the first time. The allele frequency of avenin-coding loci varied with time. In the process of variety exchange, alleles that are characteristic of varieties of non-Russian origin were replaced by alleles present in domestic varieties and then in the varieties developed by local breeding institutions. The following alleles had the highest frequency in Tyumen varieties: Avn A4 (50.0 %), A2 (25.0 %), Avn B4 (50.0 %), Bnew6 (37.5 %), Avn C1 (37.5 %), C2 and C5 (25.0 %). These alleles are of great value as markers of agronomically and adaptively important characters for the region in question. The amount of genetic diversity of oats varied with time from 0.33 in 1929–1950 to up to 0.75 in 2019. The high value of genetic diversity in modern breeding varieties of the Scientific Research Institute of Agriculture of the Northern Trans-Urals and an increase in this indicator over the past 20 years are associated with the use of genetically heterogeneous source material in the breeding process. This allowed obtaining varieties with high adaptive potentials in the natural climatic conditions of the region.
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spelling pubmed-77165432021-03-02 Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci Lyubimova, A.V. Tobolova, G.V. Eremin, D.I. Loskutov, I.G. Vavilovskii Zhurnal Genet Selektsii Original Article Molecular and biochemical markers are used to analyze the intraspecific genetic diversity of crops. Prolamin-coding loci are highly effective for assessing this indicator. On the basis of the Laboratory of Varietal Seed Identification of the State Agrarian University of the Northern Trans-Urals, 18 varieties of common oat included in the State Register of Selection Achievements in the Tyumen Region from the 1930s to 2019 were studied by electrophoresis in 2018–2019. The aim of the work was to study the dynamics of the genetic diversity of oat varieties at avenin-coding loci. For the analysis, 100 grains of each variety were used. Electrophoresis was carried out in vertical plates of 13.2 % polyacrylamide gel at a constant voltage of 500 V for 4.0–4.5 h. It was found that 44.4 % of the varieties are heterogeneous, each consisting of two biotypes. For three loci, 20 alleles were identified, 10 of which were detected for the first time. The allele frequency of avenin-coding loci varied with time. In the process of variety exchange, alleles that are characteristic of varieties of non-Russian origin were replaced by alleles present in domestic varieties and then in the varieties developed by local breeding institutions. The following alleles had the highest frequency in Tyumen varieties: Avn A4 (50.0 %), A2 (25.0 %), Avn B4 (50.0 %), Bnew6 (37.5 %), Avn C1 (37.5 %), C2 and C5 (25.0 %). These alleles are of great value as markers of agronomically and adaptively important characters for the region in question. The amount of genetic diversity of oats varied with time from 0.33 in 1929–1950 to up to 0.75 in 2019. The high value of genetic diversity in modern breeding varieties of the Scientific Research Institute of Agriculture of the Northern Trans-Urals and an increase in this indicator over the past 20 years are associated with the use of genetically heterogeneous source material in the breeding process. This allowed obtaining varieties with high adaptive potentials in the natural climatic conditions of the region. The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences 2020-03 /pmc/articles/PMC7716543/ /pubmed/33659791 http://dx.doi.org/10.18699/VJ20.607 Text en Copyright © AUTHORS, 2020 http://creativecommons.org/licenses/by/2.5/ This work is licensed under a Creative Commons Attribution 4.0 License
spellingShingle Original Article
Lyubimova, A.V.
Tobolova, G.V.
Eremin, D.I.
Loskutov, I.G.
Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title_full Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title_fullStr Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title_full_unstemmed Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title_short Dynamics of the genetic diversity of oat varieties in the Tyumen region at avenin-coding loci
title_sort dynamics of the genetic diversity of oat varieties in the tyumen region at avenin-coding loci
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716543/
https://www.ncbi.nlm.nih.gov/pubmed/33659791
http://dx.doi.org/10.18699/VJ20.607
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