Cargando…

Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island

Access to axenic cultures is crucial to extend the knowledge of the biology, lifestyle or metabolic capabilities of bacteria from different phyla. The phylum Planctomycetes is an excellent example since its members display an unusual cell biology and complex lifestyles. As a contribution to the curr...

Descripción completa

Detalles Bibliográficos
Autores principales: Rivas-Marin, Elena, Wiegand, Sandra, Kallscheuer, Nicolai, Jogler, Mareike, Peeters, Stijn H., Heuer, Anja, Jetten, Mike S. M., Boedeker, Christian, Rohde, Manfred, Devos, Damien P., Jogler, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716918/
https://www.ncbi.nlm.nih.gov/pubmed/32583191
http://dx.doi.org/10.1007/s10482-020-01437-y
_version_ 1783619252972945408
author Rivas-Marin, Elena
Wiegand, Sandra
Kallscheuer, Nicolai
Jogler, Mareike
Peeters, Stijn H.
Heuer, Anja
Jetten, Mike S. M.
Boedeker, Christian
Rohde, Manfred
Devos, Damien P.
Jogler, Christian
author_facet Rivas-Marin, Elena
Wiegand, Sandra
Kallscheuer, Nicolai
Jogler, Mareike
Peeters, Stijn H.
Heuer, Anja
Jetten, Mike S. M.
Boedeker, Christian
Rohde, Manfred
Devos, Damien P.
Jogler, Christian
author_sort Rivas-Marin, Elena
collection PubMed
description Access to axenic cultures is crucial to extend the knowledge of the biology, lifestyle or metabolic capabilities of bacteria from different phyla. The phylum Planctomycetes is an excellent example since its members display an unusual cell biology and complex lifestyles. As a contribution to the current collection of axenic planctomycete cultures, here we describe strain Mal48(T) isolated from phytoplankton material sampled at the coast of S’Arenal close to Palma de Mallorca (Spain). The isolated strain shows optimal growth at pH 7.0–7.5 and 30 °C and exhibits typical features of Planctomycetes. Cells of the strain are spherical to pear-shaped, divide by polar budding with daughter cells showing the same shape as the mother cell, tend to aggregate, display a stalk and produce matrix or fimbriae. Strain Mal48(T) showed 95.8% 16S rRNA gene sequence similarity with the recently described Thalassoglobus neptunius KOR42(T). The genome sequence of the novel isolate has a size of 6,357,355 bp with a G+C content of 50.3%. A total of 4874 protein-coding genes, 41 tRNA genes and 2 copies of the 16S rRNA gene are encoded in the genome. Based on phylogenetic, morphological and physiological analyses, we conclude that strain Mal48(T) (= DSM 100737(T) = LMG 29019(T)) should be classified as the type strain of a new species in the genus Thalassoglobus, for which the name Thalassoglobus polymorphus sp. nov. is proposed.
format Online
Article
Text
id pubmed-7716918
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Springer International Publishing
record_format MEDLINE/PubMed
spelling pubmed-77169182020-12-04 Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island Rivas-Marin, Elena Wiegand, Sandra Kallscheuer, Nicolai Jogler, Mareike Peeters, Stijn H. Heuer, Anja Jetten, Mike S. M. Boedeker, Christian Rohde, Manfred Devos, Damien P. Jogler, Christian Antonie Van Leeuwenhoek Original Paper Access to axenic cultures is crucial to extend the knowledge of the biology, lifestyle or metabolic capabilities of bacteria from different phyla. The phylum Planctomycetes is an excellent example since its members display an unusual cell biology and complex lifestyles. As a contribution to the current collection of axenic planctomycete cultures, here we describe strain Mal48(T) isolated from phytoplankton material sampled at the coast of S’Arenal close to Palma de Mallorca (Spain). The isolated strain shows optimal growth at pH 7.0–7.5 and 30 °C and exhibits typical features of Planctomycetes. Cells of the strain are spherical to pear-shaped, divide by polar budding with daughter cells showing the same shape as the mother cell, tend to aggregate, display a stalk and produce matrix or fimbriae. Strain Mal48(T) showed 95.8% 16S rRNA gene sequence similarity with the recently described Thalassoglobus neptunius KOR42(T). The genome sequence of the novel isolate has a size of 6,357,355 bp with a G+C content of 50.3%. A total of 4874 protein-coding genes, 41 tRNA genes and 2 copies of the 16S rRNA gene are encoded in the genome. Based on phylogenetic, morphological and physiological analyses, we conclude that strain Mal48(T) (= DSM 100737(T) = LMG 29019(T)) should be classified as the type strain of a new species in the genus Thalassoglobus, for which the name Thalassoglobus polymorphus sp. nov. is proposed. Springer International Publishing 2020-06-24 2020 /pmc/articles/PMC7716918/ /pubmed/32583191 http://dx.doi.org/10.1007/s10482-020-01437-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Original Paper
Rivas-Marin, Elena
Wiegand, Sandra
Kallscheuer, Nicolai
Jogler, Mareike
Peeters, Stijn H.
Heuer, Anja
Jetten, Mike S. M.
Boedeker, Christian
Rohde, Manfred
Devos, Damien P.
Jogler, Christian
Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title_full Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title_fullStr Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title_full_unstemmed Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title_short Thalassoglobus polymorphus sp. nov., a novel Planctomycete isolated close to a public beach of Mallorca Island
title_sort thalassoglobus polymorphus sp. nov., a novel planctomycete isolated close to a public beach of mallorca island
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7716918/
https://www.ncbi.nlm.nih.gov/pubmed/32583191
http://dx.doi.org/10.1007/s10482-020-01437-y
work_keys_str_mv AT rivasmarinelena thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT wiegandsandra thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT kallscheuernicolai thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT joglermareike thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT peetersstijnh thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT heueranja thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT jettenmikesm thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT boedekerchristian thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT rohdemanfred thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT devosdamienp thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland
AT joglerchristian thalassoglobuspolymorphusspnovanovelplanctomyceteisolatedclosetoapublicbeachofmallorcaisland