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Fano Factor: A Potentially Useful Information

The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the prob...

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Detalles Bibliográficos
Autores principales: Rajdl, Kamil, Lansky, Petr, Kostal, Lubomir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718036/
https://www.ncbi.nlm.nih.gov/pubmed/33328945
http://dx.doi.org/10.3389/fncom.2020.569049
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author Rajdl, Kamil
Lansky, Petr
Kostal, Lubomir
author_facet Rajdl, Kamil
Lansky, Petr
Kostal, Lubomir
author_sort Rajdl, Kamil
collection PubMed
description The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the problems is the unclear dependence of the Fano factor on the spiking rate, which is often neglected or handled insufficiently. In this paper we aim to explore this problem in more detail and to study the possible solution, which is to evaluate the Fano factor in the operational time. We use equilibrium renewal and Markov renewal processes as spike train models to describe the method in detail, and we provide an illustration on experimental data.
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spelling pubmed-77180362020-12-15 Fano Factor: A Potentially Useful Information Rajdl, Kamil Lansky, Petr Kostal, Lubomir Front Comput Neurosci Neuroscience The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the problems is the unclear dependence of the Fano factor on the spiking rate, which is often neglected or handled insufficiently. In this paper we aim to explore this problem in more detail and to study the possible solution, which is to evaluate the Fano factor in the operational time. We use equilibrium renewal and Markov renewal processes as spike train models to describe the method in detail, and we provide an illustration on experimental data. Frontiers Media S.A. 2020-11-20 /pmc/articles/PMC7718036/ /pubmed/33328945 http://dx.doi.org/10.3389/fncom.2020.569049 Text en Copyright © 2020 Rajdl, Lansky and Kostal. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Rajdl, Kamil
Lansky, Petr
Kostal, Lubomir
Fano Factor: A Potentially Useful Information
title Fano Factor: A Potentially Useful Information
title_full Fano Factor: A Potentially Useful Information
title_fullStr Fano Factor: A Potentially Useful Information
title_full_unstemmed Fano Factor: A Potentially Useful Information
title_short Fano Factor: A Potentially Useful Information
title_sort fano factor: a potentially useful information
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718036/
https://www.ncbi.nlm.nih.gov/pubmed/33328945
http://dx.doi.org/10.3389/fncom.2020.569049
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