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Fano Factor: A Potentially Useful Information
The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the prob...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718036/ https://www.ncbi.nlm.nih.gov/pubmed/33328945 http://dx.doi.org/10.3389/fncom.2020.569049 |
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author | Rajdl, Kamil Lansky, Petr Kostal, Lubomir |
author_facet | Rajdl, Kamil Lansky, Petr Kostal, Lubomir |
author_sort | Rajdl, Kamil |
collection | PubMed |
description | The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the problems is the unclear dependence of the Fano factor on the spiking rate, which is often neglected or handled insufficiently. In this paper we aim to explore this problem in more detail and to study the possible solution, which is to evaluate the Fano factor in the operational time. We use equilibrium renewal and Markov renewal processes as spike train models to describe the method in detail, and we provide an illustration on experimental data. |
format | Online Article Text |
id | pubmed-7718036 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-77180362020-12-15 Fano Factor: A Potentially Useful Information Rajdl, Kamil Lansky, Petr Kostal, Lubomir Front Comput Neurosci Neuroscience The Fano factor, defined as the variance-to-mean ratio of spike counts in a time window, is often used to measure the variability of neuronal spike trains. However, despite its transparent definition, careless use of the Fano factor can easily lead to distorted or even wrong results. One of the problems is the unclear dependence of the Fano factor on the spiking rate, which is often neglected or handled insufficiently. In this paper we aim to explore this problem in more detail and to study the possible solution, which is to evaluate the Fano factor in the operational time. We use equilibrium renewal and Markov renewal processes as spike train models to describe the method in detail, and we provide an illustration on experimental data. Frontiers Media S.A. 2020-11-20 /pmc/articles/PMC7718036/ /pubmed/33328945 http://dx.doi.org/10.3389/fncom.2020.569049 Text en Copyright © 2020 Rajdl, Lansky and Kostal. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Rajdl, Kamil Lansky, Petr Kostal, Lubomir Fano Factor: A Potentially Useful Information |
title | Fano Factor: A Potentially Useful Information |
title_full | Fano Factor: A Potentially Useful Information |
title_fullStr | Fano Factor: A Potentially Useful Information |
title_full_unstemmed | Fano Factor: A Potentially Useful Information |
title_short | Fano Factor: A Potentially Useful Information |
title_sort | fano factor: a potentially useful information |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7718036/ https://www.ncbi.nlm.nih.gov/pubmed/33328945 http://dx.doi.org/10.3389/fncom.2020.569049 |
work_keys_str_mv | AT rajdlkamil fanofactorapotentiallyusefulinformation AT lanskypetr fanofactorapotentiallyusefulinformation AT kostallubomir fanofactorapotentiallyusefulinformation |